Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3046 |
Symbol | |
ID | 4310528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3363687 |
End bp | 3364526 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638150886 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_774936 |
Protein GI | 115353097 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC CGAACAAACC GCTGTCGACG GGCGTTCTCG CCTTCGGCTT CCTGTTTCTG TACATCCCGA TCATCAGCCT GGTCGTGTAC TCGTTCAACG AGTCGAAGCT GGTGACGGTG TGGTCGGGCT TCTCGCTGAA GTGGTACGCG GCGCTTCTGG AAGACGACGA GCTGCTCACC GCCGCGTGGC TGTCGCTGAA GATCGGCCTG CTGACGGCCA CCGCGTCGGT CGTGATCGGC ACGTGGGCGG GCTTCGTGCT CGCGCGCTTC GGCCGTTTCA AGGGCTTCAC GCTGTACACG GGGATGATCA ACGCGCCGCT GGTGATTCCG GAGGTGATCC AGGGGATCTC GCTGCTGTTG CTGTTCGTTG CGCTGGAGCA GATGTTCGGC TGGCCGAAGG GGCGCGGGAT GGTGACGATC TGGATCGGTC ACGTGATGCT GTGCGTGTCG TACGTGGCGA TCATCGTGCA GTCGCGCGTG AAGGAGATGA ACAAGTCGCT CGAAGAAGCG GCGCTGGATC TGGGCGCGAC GCCGCTGAAG GTGTTCTTCG TGGTGACGCT GCCGCTGATC TCGCAGGCGC TGCTGTCGGG CTGGCTGCTG TCGTTCACGC TGTCGATCGA CGATCTGGTG CTGTCGGCGT TCCTGTCGGG GCCGGGCTCG ACGACGCTGC CGCTGGTGGT GTTCTCGCGC GTGCGGCTCG GCCTGAATCC CGAGATGAAC GCGCTGGCGA CGCTGTTCAT CACCGCGGTG ACGATCGGCG TGATCGTCGT GAACCAGATG ATGATCGCGC GCGAACGGCG TCGGGTGGGC GACCTGAAGG CGGCGTTCGC GGCGGCCTGA
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Protein sequence | MIKPNKPLST GVLAFGFLFL YIPIISLVVY SFNESKLVTV WSGFSLKWYA ALLEDDELLT AAWLSLKIGL LTATASVVIG TWAGFVLARF GRFKGFTLYT GMINAPLVIP EVIQGISLLL LFVALEQMFG WPKGRGMVTI WIGHVMLCVS YVAIIVQSRV KEMNKSLEEA ALDLGATPLK VFFVVTLPLI SQALLSGWLL SFTLSIDDLV LSAFLSGPGS TTLPLVVFSR VRLGLNPEMN ALATLFITAV TIGVIVVNQM MIARERRRVG DLKAAFAAA
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