Gene Bamb_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2344 
Symbol 
ID4309325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp2581180 
End bp2581746 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content69% 
IMG OID638150178 
Productmembrane protein-like protein 
Protein accessionYP_774234 
Protein GI115352395 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGA TCAGGACACT CAACGAAGCC CGCCAGCAGA TCCAGCAGTC GATCTTCGAT 
CTGTTCAAGG GGTTGACCTT CGGCGAACGG CTCACGCAGG GTGCGCTGAT GGCGCTGCAG 
GCGGTGTGCG GCGCGTGCCT CGCGTACACG ATCGGCCGCG CGCTGCACAC CGAACAGGCC 
GTGTGGGCGG CGGTCACCGC GATCGCCGTC ACGCAGCACA ACTACTCGGA CACGATGTCG 
CTGTCGCGCG ACCAGTTCAT CGGCGCGATG ATCGGCGGCC TGCTCGGCTT CGCGGGCGCG 
GCGCTCGGCG GCGACCGCCT CGTCGCCTAT GCGCTCGCGG TCGCGCTCAC GATCGTCAGC 
TGCTGGTGCC TGAACGTCGG CAGCGCGGCG CGGCTCGGCG GCGTGACCGC GACGATCGTG 
CTGCTGTTTC CGGGCAACGG CCCGCTATGG GATATTCCGC TGATGCGACT CGGGGAAGTG 
GCGCTCGGCA CCGTGTGCGC GCTGGCCGTG TGCTGGGCGA TGTCGCTGAT CGAGCGACGC 
TGGTTCCGCC GGGCGGCGGC AAAGTGA
 
Protein sequence
MDTIRTLNEA RQQIQQSIFD LFKGLTFGER LTQGALMALQ AVCGACLAYT IGRALHTEQA 
VWAAVTAIAV TQHNYSDTMS LSRDQFIGAM IGGLLGFAGA ALGGDRLVAY ALAVALTIVS 
CWCLNVGSAA RLGGVTATIV LLFPGNGPLW DIPLMRLGEV ALGTVCALAV CWAMSLIERR 
WFRRAAAK