| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2012 |
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| Symbol | |
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| ID | 4309054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2207996 |
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| End bp | 2209000 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149829 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_773902 |
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| Protein GI | 115352063 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.62042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTGC CTTTCCGCTT TTACGCTTTC GTGCTGATGT TCGCGGCCAT CACGTCGTCA
TTGCTGGGCT GCGCCTCGCA GGGCAAGCCG CCGCCGTCCA TCTCGCTCGA TGAGCCGGTG
CAGGCCCAGC CGTTGCCCGA ACTGCCCAAG CCGGTCGAAG TCGTCGCCGT GCCCGAGCCG
CTGGCGCTGC CGGCGCAGTT GAAGCCGCTG CCGGAGGTGG GCGAGGCAGC GCCCGTGCCC
GAGCCGGCCG ACGAGAAGGT GCGCGTCTCG CGCGCCAATG CCGAGGCGCG CATCGCGCCG
ACCCGCGAGG GCTACGTCAA CGCGATTCAG GTGTGGCCGT ATAGCGACGG CGCGTTGTAT
CAGGTCTATG CCGCGCCGGG GCGCGTCACC GTGGTTTCGC TCCAGCCCGG CGAGGAACTT
GTCACCGTCG CCGCTGGCGA TACCGTGCGC TGGATCGTCG GCGACACGTC CAGCGGCAGC
GGCGAGGCGC TGCGCGTCAA TGTGCTGGTC AAGCCCACCC GCTCGGGCCT GAAGACCAAT
CTGGTCATCA CCACCAGCCG GCGGACGTAC TTGCTGGAAC TGACCTCAAC GGAAAAGGCA
TGGATGGCGT CGGCGTCATG GGACTACCCA AAAGACCGGA TGCTGGCCTT GCAGCGTCAA
TCGCAGGCGG CCAGCGCCGC CGCGCCGGTC GATACCGGCC TGGCACTGGA GAAGATCCGC
TTCCGCTACG CGATCAGCGG CAGCAATCCG CCGTGGAAGC CGCAGCGGGC CTTCGATGAT
GGCGAGAAAG TCTATATCCA GTTCCCGCCG GGTATCGCCC AAGGCGAACT GCCGCCGCTG
TTCGTCATTG GCGCGCAGGG TGATGGTCAG CTCGTCAACT ACCGTTTCCG TTCGCCGTAC
TACATCGTGG ATCGCCTCTT TGGTGCGGCT GAACTGCGCT TGGGCGGCGA TGGTAGTGAC
GTGGTGCGGA TCGAGCGCAC AGACGGCGTG GCGCGGAGGA ACTGA
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| Protein sequence | MNLPFRFYAF VLMFAAITSS LLGCASQGKP PPSISLDEPV QAQPLPELPK PVEVVAVPEP
LALPAQLKPL PEVGEAAPVP EPADEKVRVS RANAEARIAP TREGYVNAIQ VWPYSDGALY
QVYAAPGRVT VVSLQPGEEL VTVAAGDTVR WIVGDTSSGS GEALRVNVLV KPTRSGLKTN
LVITTSRRTY LLELTSTEKA WMASASWDYP KDRMLALQRQ SQAASAAAPV DTGLALEKIR
FRYAISGSNP PWKPQRAFDD GEKVYIQFPP GIAQGELPPL FVIGAQGDGQ LVNYRFRSPY
YIVDRLFGAA ELRLGGDGSD VVRIERTDGV ARRN
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