Gene Bamb_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1659 
Symbol 
ID4310980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp1832912 
End bp1833532 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID638149474 
ProductTetR family transcriptional regulator 
Protein accessionYP_773550 
Protein GI115351711 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAC AGCGCTTAAC TCGCGAGCAG AGCCGGGACC AGACGCGCGA ACGTCTGCTG 
AAAGCCGCGC ACCGGATTTT TCTGAAGAAA GGCTATGTTG CCGCGAGCGT CGAGGACATC 
GCGGCGGCCG CCGGCTATAC GCGCGGCGCG TTCTACTCGA ACTTCCGCAG CAAGTCGGAC 
CTGCTGCTCG AGCTGCTCGA GCGCGACCAT GACTCGGTGC GGGCCGATTT CGAGGCGATC 
TTCGAGGAGG GCGGGCCGCG CGAGCAGATG GAGTCGACGG CGCTCGCGTA CTACAGCACG 
CTGTTTCGCG ACGACGAGTA TTCGCTGCTG TGGGGCGAGG CGAAGCTGCA GGCGGCGCGC 
GACGCGAAGT TTCGCGTGCG CTTCAACCAG TTCCTGCACG GCAAGCGGCT GCAGATGGCC 
GAGTTCATCC AGCGCTTCGC CGAGCGCGCG GGCACGCCGC TGCTGCTGCC GGCGGACACG 
CTCGCCTTCG GGCTGATGTG CCTGTGCGAC GGCGTGCAGT CGTATTACAC AGCCGATCCG 
CAGCACGTGT CGGCCGACGC GGCCGAAGCG GTGCTGGCGG GGTTCTTCGC ACGGGTCGTG 
CTGGGTCGCG AGCCGGGCTG A
 
Protein sequence
MKPQRLTREQ SRDQTRERLL KAAHRIFLKK GYVAASVEDI AAAAGYTRGA FYSNFRSKSD 
LLLELLERDH DSVRADFEAI FEEGGPREQM ESTALAYYST LFRDDEYSLL WGEAKLQAAR 
DAKFRVRFNQ FLHGKRLQMA EFIQRFAERA GTPLLLPADT LAFGLMCLCD GVQSYYTADP 
QHVSADAAEA VLAGFFARVV LGREPG