Gene Bamb_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1310 
Symbol 
ID4309019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1436921 
End bp1438093 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content67% 
IMG OID638149119 
Productoxidoreductase domain-containing protein 
Protein accessionYP_773202 
Protein GI115351363 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACG GACAGATTCT GCTCGGACAT TCGATTCCCT GGGGCATGGT CGGCGGCGGC 
CTCGGCAGCC AGATCGGCTA CAGCCACCGG TCGGCCTCGT TGCGCGACGG CAGCTTCCGG
CTGGTCGCCG GCGCGTTCGA TATCGATGCC GAGCGCGGGC GGCAGTTCGG CGTGAAGCTC
GGCGTCGACG CCGGGCGCTG CTATCCCGAC TACCGGACGA TGTTCGATGC CGAGGCGCGC
CGCGCCGATG GCATCCGCGC GGTGTCGATC GCGACGCCGA ACAACACGCA CTTCGAGATC
TGCCGCGCGG CGCTCAACGC AGGGCTGCAT GTGGTCTGCG AGAAGCCGCT GTGCTTCACG
ACCGCGGAGG CCGAGGCGCT CCAGCGGCTG TCGGTCGAGA AGAACCGCAT CGTCGGCGTC
GCGTACGGCT ATTCGGGCCA CCAGATGATC GAGCAGGCGC GCGAGATGAT CGCGCGCGGC
GATCTCGGCG AGATCCGCAT CGTGCAGATG CAGTTTGCCC ACGGCTTTCA CAGCGAGGGT
GTCGAGGCCG CCAGCGCGGC CGCGCGCTGG CGCGTCGATC CGACGTTCGC GGGCCCGAGC
TACGTGCTCG GCGACATCGG CACGCACCCG CTGTACATCT CGGAGGTGAT GGCGCCCGAG
CTGAAGATCC GCCGGCTGAT GTGCTCGCGG CAGAGCTTCG TGAAGAGCCG CGCGCCGCTC
GAGGACAACG CGTTCACGAT CATGGAATAC GACACGGGCG CGATCGGCTA CGTCTGGTCG
AGCGCGGTGA ACGCGGGCTC GATGCACGGG CAGAAGGTGC GCGTGATCGG CTCGAAGGCG
AGCGTCGAAT GGTGGGACGA GCATCCGAAC CAGTTGCGCT ACGAAATCCA GGGGCAGCCC
GCGCAGGTGC TCGATCGCGG GATGGGCTAT CTGCATCCGC ACGCATTGCG CGAGGATCGC
ATCGGCGCCG GGCATCCGGA AGGGCTGTTC GAAGCGTGGT CGAACCTGTA TGCGCGTTTC
GCGCTCGCGA TGGACGCGGC CGATCGCGGC GACACGCAAG CATTGCAGAA CATCTGCTTT
CCGGACGTTC ACGCAGGCGT CGAAGGCGTG CGCTGGGTGG AGAACTGCGT GCGCTCCGCC
GATGCGGGCG GCGTGTGGGT CGACTATCGT TGA
 
Protein sequence
MIDGQILLGH SIPWGMVGGG LGSQIGYSHR SASLRDGSFR LVAGAFDIDA ERGRQFGVKL 
GVDAGRCYPD YRTMFDAEAR RADGIRAVSI ATPNNTHFEI CRAALNAGLH VVCEKPLCFT
TAEAEALQRL SVEKNRIVGV AYGYSGHQMI EQAREMIARG DLGEIRIVQM QFAHGFHSEG
VEAASAAARW RVDPTFAGPS YVLGDIGTHP LYISEVMAPE LKIRRLMCSR QSFVKSRAPL
EDNAFTIMEY DTGAIGYVWS SAVNAGSMHG QKVRVIGSKA SVEWWDEHPN QLRYEIQGQP
AQVLDRGMGY LHPHALREDR IGAGHPEGLF EAWSNLYARF ALAMDAADRG DTQALQNICF
PDVHAGVEGV RWVENCVRSA DAGGVWVDYR