| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1303 |
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| Symbol | |
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| ID | 4309012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1427940 |
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| End bp | 1429895 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149112 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_773195 |
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| Protein GI | 115351356 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0524] Sugar kinases, ribokinase family
[COG3892] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCGT TGAACTTTCC GACTGACCGC CCCATCGATC TCGCTTGCCT CGGCCGCGTC
GCCGTGGATC TTTACGCGCA GCAGTACGGC AGCCGCCTCG AGGACGCGCG CAGCTTCCAG
ATGTATCTCG GCGGCTCGTC GGGCAACGTC GCGTTCGGCG TCGCCCGGCT CGGGCTGAAG
ACCGCGATGA TCTCGCGCGT CGGCGACGAG CAGATGGGCC GCTTCGTGCG CGAGACGCTC
GAGCGCGAAG GTTGCGATAC GAGCCAACTG CAGACCGATC CTGAACGCCT GACCGCGCTC
GTGCTGCTCG GGCTGAAGGA CCGCGACACG TTCCCGCTGC TGTTCGTGCG CGAGAACTGC
GCGGACATGG CCGTGCGCGC CGACGAGATT CGCGAGGACT TCATCGCCGG CTGCCGCGCG
CTCGCGATCA CCGGCACCCA TCTGTCGACG CCGGCCACCC GCGAAGCGTC GCTGACCGCG
CTCGGCTACG CGCGCCGCCA CGGCGTCGTG CGCGTCCTCG ACATCGATTA CCGGCCGGTG
CTGTGGGGGC TGACCGCGCG CGGCGCGGGC GAGAACCGCT ACGTGCCGGA TGCGCAGGTC
ACGCGGCAGC TGCAGCAGGT GCTCGGCGAG TTCGACCTGC TGGTCGGCAC CGAGGAGGAA
TTCCTGATCG CGGGCGGCGT GCCGCACGAC CTGATCGCGT CGCTTCAGGC CGTGCGCCGC
GCGAGCGGCG CGGTGCTGGT GGTCAAGCGC GGCGCGCTCG GCTGCTGCGT GATCGAGGGC
GACATCCCCG CACGCATCGA CGATGCACCG ACTTTCCACG GCGAACGCGT CGAAGTCCTG
AACGTGCTCG GCGCGGGCGA CGCATTCCTG TCGGGCCTGC TGTCGGGGCT GCTGCGCGGG
CGCGACTGGG CCGAATCGAC GCGCATCGCG AATGCGTGCG GCGCGATCGT CGTGTCGCGC
CACGCGTGCT CGGCCGCGAT GCCGACGCCG GCCGAGCTCG CTCACTGGTT CGGCGGCAGC
CGCCACCCGC AGGTCGACGC CGATCGCACG CTCGCGCACC TGCATCGCGT GACGGTGCCG
CGCCGCGAGT GGGACGAACT GTGCGTGATG GCGTTCGACC ATCGCAGCCA GTTCTACGAA
CTCGCGGTGC AGGCCGGCGC GGACGAAGCA CAAATCAAGA CGCTCAAGCG CCTGCTCGTG
CGCGCGGTCG AACAGGTCGA GCGCGATCGT CATCTCGAAG GCCACGTCGG CGTGCTGATC
GACGGCGGCG CCTACGGCCG CGACGCGCTC GCGCAGGCGA CCGGCCGCGG CTGGTGGGTC
GGCCGGCCAG TCGAATTGCC CGGCTCGCGG CCGCTGCGTT TCGACGACAC GCGCTCGGTC
GGCTCGTCGC TCACGCACTG GCCGACCGAA CAGGTCGTGA AGTGCCTCGT CCACTACCAC
CCCGACGACG ACGTCGACCT GCGCGTCGAG CAGGAGCAGC GCGTGCTGGA ATTGTGGGAA
GCCACGCGCG CCAGCGGCAA CGAGCTGCTG CTCGAAATGA TTCCGCCGCG CGCGGTCACG
CCGGCCGGCA CCGAGGACGA CGCGGTGCTG CGCACGGTCG CGCGTTTCTA CAACCTCGGC
GTGATGCCCG AGTGGTGGAA GCTGCCGCCG CTGAGCGCCG ACGGCTGGGC ACGGCTCGAG
ACGCTCGTGG CCGAGCGCGA CCATCACTGC CGCGGCGCGG TGATCCTCGG GCTGAACCAG
CCGCTGCAGT ATCTGGTCGA CAGCTTCCGC TCGGCGACCA ACTCGATCGT CAAGGGCTTC
ATGGTCGGCC GCACGCTGTG GGCCGATGCG TCGCTGCGCT GGCTCGCCGG CGAGAGCGAC
GACCAGGCGC TGATCGACGA AGTGGCCGGC AATTTCACGC AGCTGGTCGA CGCGTGGCTC
GGCCGCCGTG CCGCCGCGCG CGCCGCCGCG GCGTGA
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| Protein sequence | MSPLNFPTDR PIDLACLGRV AVDLYAQQYG SRLEDARSFQ MYLGGSSGNV AFGVARLGLK
TAMISRVGDE QMGRFVRETL EREGCDTSQL QTDPERLTAL VLLGLKDRDT FPLLFVRENC
ADMAVRADEI REDFIAGCRA LAITGTHLST PATREASLTA LGYARRHGVV RVLDIDYRPV
LWGLTARGAG ENRYVPDAQV TRQLQQVLGE FDLLVGTEEE FLIAGGVPHD LIASLQAVRR
ASGAVLVVKR GALGCCVIEG DIPARIDDAP TFHGERVEVL NVLGAGDAFL SGLLSGLLRG
RDWAESTRIA NACGAIVVSR HACSAAMPTP AELAHWFGGS RHPQVDADRT LAHLHRVTVP
RREWDELCVM AFDHRSQFYE LAVQAGADEA QIKTLKRLLV RAVEQVERDR HLEGHVGVLI
DGGAYGRDAL AQATGRGWWV GRPVELPGSR PLRFDDTRSV GSSLTHWPTE QVVKCLVHYH
PDDDVDLRVE QEQRVLELWE ATRASGNELL LEMIPPRAVT PAGTEDDAVL RTVARFYNLG
VMPEWWKLPP LSADGWARLE TLVAERDHHC RGAVILGLNQ PLQYLVDSFR SATNSIVKGF
MVGRTLWADA SLRWLAGESD DQALIDEVAG NFTQLVDAWL GRRAAARAAA A
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