Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1049 |
Symbol | |
ID | 4308646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1140528 |
End bp | 1141703 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638148857 |
Product | glycosyl transferase family protein |
Protein accession | YP_772942 |
Protein GI | 115351103 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGA TCGTCACGCT GCTCGACTGG CTCCTGCTCG CATTCACGCT GGCCGCGTCC GGCTACGCGC TCGCCGCGGC CTTCGCGCCG CGCCCGCGCA CGCCGCGCAC GGCGGCGCGC GACGGCTTCG CGCCCGTCAG CGTGCTCAAG CCGCTGTGCG GCGCGGAGCC GCACCTGTAC GAGAATCTCG CGACGTTCTG CGAGCAGCGC CATCCGCGCC ATGAAGTGCT GTTTGGCGTC GCGTCGGCGG CCGATCCGGC CGTCGCCGTG GTCGAGCGCT TGCGTGCCGA CTATCCGGAG TGCGACATCA CGCTCGTGAT CGACGCGCGC GTGCACGGCA AGAATCTGAA GGTCAGCAAC CTGATCAATC TGGCCGAACG CGCGAAGTAT GGCCGCATCG TGATCGCGGA CAGCGACATC GCGGTGAAGC CCGACTATCT GGAACGCGTG ACGGCGCCGC TCGCCGACGC GTCGGTCGGC GTCGTCACGT GTCTGTATCA TGCGCGCAGC GTCGGCGGGT TCTGGACGCG GATCGGCGCG CAGTTCGTCG ATGCGTGGTT CGCGCCGTCG GTGCGGATCG CGCACCTCGG CCGCTCGAGC CACTTCGGCT TCGGCGCGAC ACTTGCGCTC ACGCGCGACA CGCTCGACCG GATCGGCGGC TTGCTCGCGC TGAAGGACGA GCTGGCCGAC GATTTCTGGC TCGCCGAACT GCCGCGCCGC CTCGGGCGAC GCACCGCGCT GTCCGAGGTC GAGGTCGCGA CCGACGTGAT CGAGCCGTCG TTCGGGCCGC TCTGGCACCG CGAGACGCGC TGGCTGCGCA CGATCCGTTC GCTGAACCCG GCCGGCTTCA CGTTCCTGTT CATCACGTTT ACCGCGCCGT GGCTCGCGAT CGGCGCGGCG CTCGCGCTGC GTCTCGACGG CACCTTCGCC GGCACGCTGG CGGGTGGCGC GGCCATCGTG GGCACGTTCG GGCGGCTGGT GCTGCACGCG CGCGGCGCGG ACGGCTGGCG CGCGTTCTGG CGCGATCTGC CGCTCGTCGC GGTGCGCGAC ACGCTGCTCA CGCTCGAATG GCTCGCGGCC GCGTTCGGCA CGCACGTCGT GTGGCGCGGC GCGCGGATGA CGGTCGTTGG CGGCGAGCGT GCGACGGCGG CGGTGGAAGG CGGGGACGGC CGTTAA
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Protein sequence | MTPIVTLLDW LLLAFTLAAS GYALAAAFAP RPRTPRTAAR DGFAPVSVLK PLCGAEPHLY ENLATFCEQR HPRHEVLFGV ASAADPAVAV VERLRADYPE CDITLVIDAR VHGKNLKVSN LINLAERAKY GRIVIADSDI AVKPDYLERV TAPLADASVG VVTCLYHARS VGGFWTRIGA QFVDAWFAPS VRIAHLGRSS HFGFGATLAL TRDTLDRIGG LLALKDELAD DFWLAELPRR LGRRTALSEV EVATDVIEPS FGPLWHRETR WLRTIRSLNP AGFTFLFITF TAPWLAIGAA LALRLDGTFA GTLAGGAAIV GTFGRLVLHA RGADGWRAFW RDLPLVAVRD TLLTLEWLAA AFGTHVVWRG ARMTVVGGER ATAAVEGGDG R
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