Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0685 |
Symbol | |
ID | 4308562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 764752 |
End bp | 765312 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148480 |
Product | Tfp pilus assembly protein FimT-like protein |
Protein accession | YP_772578 |
Protein GI | 115350739 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGC ACCGGCAGGT CGTCAAAAAA GGCATGCGCA GCTGCGGCGG CTTCACGCTC GTCGAGCTGA TGGTCGCGAT CGCGCTGGCC GCGTCGATCG GACTTTTCGC AGCACCCGCA TTCAATCAAT GGCACATGCG CGAACGCGTG GATGCGCGCT CGCGCGCGCT CCTCGGTGCG TTGTCGTTTG CACGCACTGA GGCGACGCGT CTCGGCGTGC GCGTCACGCT GTGCCGAGCC GGGCGCGACG GCGACTGCAT GCGTTCCGGC GAGCGCTGCG ATCCGGCGGA ATGGTCGTGC GGCTGGATTG TCAGCGGGCA GTTCGACGGA CAGTCGCGCG TGCTGCGGCG TTATCCGCGC GATGCCGACA TTGCCGTCGC GGGCGTGGCG CACGATCTGG CGTTCGCGCC GCCGGCGGGG CAGGTGATCG GCGGGATCCG GCGCTTCGAA TTGCGTCCGC AGCGCATGCT GTCCGGCGAC GACGCACGCG TGTCGCGTTG TATCCGGATC GCGGCGGGCG GCCGGGCGCG CGTCGCCGCC GGGCGTTGCG AGGCGGCATG A
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Protein sequence | MELHRQVVKK GMRSCGGFTL VELMVAIALA ASIGLFAAPA FNQWHMRERV DARSRALLGA LSFARTEATR LGVRVTLCRA GRDGDCMRSG ERCDPAEWSC GWIVSGQFDG QSRVLRRYPR DADIAVAGVA HDLAFAPPAG QVIGGIRRFE LRPQRMLSGD DARVSRCIRI AAGGRARVAA GRCEAA
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