| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0230 |
|---|
| Symbol | |
|---|
| ID | 4309978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 265738 |
|---|
| End bp | 266571 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638148009 |
|---|
| Product | OmpW family protein |
|---|
| Protein accession | YP_772124 |
|---|
| Protein GI | 115350285 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000579119 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA CCCTTCTCTG CGCGGCGGCC GGCGCCGCCG CCCTGGCGCC GCTCGCGGCG
CACGCGCAGA GCGCCGGCAG CAACGTCGTC ACGCTGGGCT GGTTCCACGT GATGCCGCAG
CAGAGCAGCA CGCCGATGAC GACCAACGTC GCGCCGACGC CGATCAACAC GCCGCTGCGG
CTGCCGCCGT CGTTCACGTC ACCGGGCACC GGGCTGCGCA CGAGCGGCGC CGATACCGTC
GGCCTGACGG TCAGTCACTT CCTGACCGAC CATATCGCGG TCACGTCGGT GGCCGGCGTA
CCACCGGTGT TCAAGGTATC GGGCCAGGGG ACGATCCGGC CGCCGGGCCC GGCCGGCGCG
CTCGGCACGC AGAACATCGG GCTCGGCTCG GTGAACCCGA TCGTGAAGAG CGTGCGGCAG
TGGAGCCCGG CGTTGATCCT GCAGTACTAC TTCGCCCAGG CGAACGCGAA GTTCCGGCCG
TTCCTCGGCC TCGGCGTGTC GTACAACTGG TTCAGCGACC TGCAGCTCAA CACGAACTTC
ATCAAGCAGA CGCAGGACAA CCTCGGCGCG ATTCTCGCGG CGGGCGCGGG CAAGCCGGGT
ACGACCTCGG TGGAGGCGAA GGCATCGTCG TCATGGCAGC CGGTGTTCAA CGCAGGCCTG
CAGTACAACA TCACCGAGCA TTTCGGGCTG GTCGCGTCGG TGACCTACAT CCCGCTGAAG
ACGACGTCGA CGGTGACGAT CAAGGCGGCC GACGGCACGG TGCTCTCCGA GTCGAAATCG
GACCTGAAGG CCGATCCGAT CATCAGCTAT GTCGGGATGA CGTACAAGTT CTGA
|
|---|
| Protein sequence | MKKTLLCAAA GAAALAPLAA HAQSAGSNVV TLGWFHVMPQ QSSTPMTTNV APTPINTPLR
LPPSFTSPGT GLRTSGADTV GLTVSHFLTD HIAVTSVAGV PPVFKVSGQG TIRPPGPAGA
LGTQNIGLGS VNPIVKSVRQ WSPALILQYY FAQANAKFRP FLGLGVSYNW FSDLQLNTNF
IKQTQDNLGA ILAAGAGKPG TTSVEAKASS SWQPVFNAGL QYNITEHFGL VASVTYIPLK
TTSTVTIKAA DGTVLSESKS DLKADPIISY VGMTYKF
|
|---|
| |