Gene Bamb_0227 details

Gene Information

• Locus tag: Bamb_0227
• ID: 4309975
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 262522
• End bp: 263157
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638148006
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_772121
• Protein GI: 115350282
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0118628
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTGC ATACGTGGTG GCTTTTCGTG GCGACGGTGT TCGTCGTGTC GGCGATTCCG 
GGTCCGAACA TGCTGCTCGT GATGACGCAC GGCGCGCGGC ACGGGCTGCG CCGCTCGTCG 
GCGACGATGG CCGGCTGCCT GAGCGCGCTG GTGCTGATGC TGGCGGTGTC CGCGGCGGGG 
CTCGGGGCGG TCCTCGAGGC ATGGCCGGCG ATGTTCGATG GATTGCGCCT CGCGGGCGCG 
GCCTATCTGA TCTATCTCGG CGTGAAGGCG TGGCGCGCCC GCATCGACGA CGCGCCGGCC 
GGCGACGTCG ACGCCGTTTC GCAGGGCGCA TCGGCATCGC GCTGGACGCT GTTCCGCAAT 
GGTTTCCTGG TCGCGGGCAG CAACCCGAAG GCGATCCTGT TCGCGGCCGC GCTGCTGCCG 
CAGTTCATCA ATGCCGCCGA GCCGACGCTG CCGCAATTCG GCATCCTCGT CGTCACGTTC 
GCGGTGATCG AGGTGAGCTG GTATCTCGTC TACGCGTCGT TCGGCACGCG CATCGGCGCG 
ACGCTGAAGA GCCAGAGCGT CGCGAAGGTC TTCAACCGTC TGACGGGCGG CATCTTCGTC 
GGCTTCGGCG CGATGATGGC GCTGGTTCGC CACTGA 

 

Protein sequence

MNLHTWWLFV ATVFVVSAIP GPNMLLVMTH GARHGLRRSS ATMAGCLSAL VLMLAVSAAG 
LGAVLEAWPA MFDGLRLAGA AYLIYLGVKA WRARIDDAPA GDVDAVSQGA SASRWTLFRN 
GFLVAGSNPK AILFAAALLP QFINAAEPTL PQFGILVVTF AVIEVSWYLV YASFGTRIGA 
TLKSQSVAKV FNRLTGGIFV GFGAMMALVR H