Gene Bamb_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0212 
Symbol 
ID4309174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp247296 
End bp247976 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content70% 
IMG OID638147991 
Producthypothetical protein 
Protein accessionYP_772106 
Protein GI115350267 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAGA CTTCACCGGT TATGGAAGCG CACACGTTCG TGGCGCGCGA TTTCATCGGC 
GGTCACGCCG TCCTCGACTT CGTCAACACG GTGACCGGCC GCGACGACAC GCCGCGCGAC 
TGGCTGCCCG ATTACGACGC GTATCTGGCG TGGCTGGCGT CGGCGACCTT GCTCCCGGCG 
CTCGACCTGA AGCGGCTCGC GGCCCGCGCG GCCGAAGCCC CGGCGGCGGC CGACCGCGCG 
TTGCGCGATG CCAAGGGCCT GCGTGAAGCG TTGTTCGGGA TCTTCGATGC GCTCGCACAC 
CGCGCATCGC CGGCCGCAGC GGATCTCGCC ACGCTGGAGC ACGCGTGGCG GCGGGCGGTG 
AGCAGGCAGC GGCTGGTCGC GACGGCCGGA CGAGTGGCAT TCGGCTACGC GCCGGATACG 
CGCGTCGACG CGGATCTGCA CCTGCCCGCC GAGCTGATTG CGCTCGACGC CGTGAAGCTT 
CTCGACGCGA TACCGGACGG ACGGCTCCGG ATGTGCGCGG GTCCGAATTG CGCGTGGCTG 
TTCATCGACG GGTCGAAGAC TGGGCGTCGC AAGTGGTGCG ACATGGCAAC CTGTGGAAAC 
GTCGCGAAGG CGCGACGGCA CTACCACGCG ACGAGGCACG GGCTGGCGGG GGCGGCGCAC 
GATCGCGACG CGGCCGAATA G
 
Protein sequence
MSKTSPVMEA HTFVARDFIG GHAVLDFVNT VTGRDDTPRD WLPDYDAYLA WLASATLLPA 
LDLKRLAARA AEAPAAADRA LRDAKGLREA LFGIFDALAH RASPAAADLA TLEHAWRRAV 
SRQRLVATAG RVAFGYAPDT RVDADLHLPA ELIALDAVKL LDAIPDGRLR MCAGPNCAWL 
FIDGSKTGRR KWCDMATCGN VAKARRHYHA TRHGLAGAAH DRDAAE