Gene Bamb_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0116 
Symbol 
ID4308590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp134492 
End bp134971 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID638147894 
Producttranscription activator, effector binding 
Protein accessionYP_772011 
Protein GI115350172 
COG category[L] Replication, recombination and repair 
COG ID[COG3449] DNA gyrase inhibitor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGGC ATCAAGTCGA GATCCGGCGG CTGCCGGAAC TGCGCGGTTA TGCGGTGCCG 
CATACGGGCG CGTACCTGAA GATCGGCGAC GCGTTCGGGC AGATCGGCGC GTGGGTCGCG 
CAGCACGGGC TGATCGGCCC CGGCGCGAAG ATGATCGGGA TCTTCTACGA CGATCCCGAT 
ACCACGCCGC AAGCGCAATT GCGCGCGAAA GCGTGCTTCG TGCCGGCCGA CGGCGCGCCG 
GATGTCGAGC CGACGCCGCC CGTCGAGCGC GTGACGGTCG CCGGTGGCGA GTATGCGGTG 
CTGATGCATA CGGGACCCTA TGCGGACCTG AAGGCGGCCT ACCAGTGGCT GTACGGCGAC 
TGGCTGCGTC ACTCGGGCCG CGAAGCCGCC GACGCGCCGC CGTTCGAGCT GTATCTGAAT 
ACCCCGATGG ATGCGGCGCC GGCCGACCTG CGCACCGAGA TTCATTTGCC GCTGCGTTGA
 
Protein sequence
MFRHQVEIRR LPELRGYAVP HTGAYLKIGD AFGQIGAWVA QHGLIGPGAK MIGIFYDDPD 
TTPQAQLRAK ACFVPADGAP DVEPTPPVER VTVAGGEYAV LMHTGPYADL KAAYQWLYGD 
WLRHSGREAA DAPPFELYLN TPMDAAPADL RTEIHLPLR