Gene Bamb_0098 details

Gene Information

• Locus tag: Bamb_0098
• Symbol: atpC
• ID: 4311226
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 108580
• End bp: 109005
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638147876
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_771993
• Protein GI: 115350154
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.712946
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACCA TCAAAGTAGA CGTCGTCAGC GCGGAAGAGC AGATCTTCTC GGGTGAGGCG 
AAATTCGTCG CGCTGCCGGG CGAAACGGGT GAGCTGGGCA TTCTGCCGGG TCACACGCCG 
CTGATCACGC GGATTCGTCC GGGTGCGGTG CGCATCGAAG TCGAGGGCGG CAACGACGAA 
TTCGTGTTCG TCGCGGGCGG CATTCTCGAA GTGCAGCCGG GCGCCGTGAC GGTGCTCGCC 
GACACCGCGA TCCGCGGCAA GGACCTCGAT GCGGCGAAAG CCGAGGAAGC GCGCAAGCGT 
GCCGAGGAAA CGCTGCAGAA CGCGAAGTCG GACCTCGACC TCGCAAAGGC GCAATCCGAG 
CTCGCGACCG CGATGGCGCA GCTTGAGGCG ATCCAGCGCC TCGCGAAGAT TCGCAGCCGG 
CACTAA 

 

Protein sequence

MATIKVDVVS AEEQIFSGEA KFVALPGETG ELGILPGHTP LITRIRPGAV RIEVEGGNDE 
FVFVAGGILE VQPGAVTVLA DTAIRGKDLD AAKAEEARKR AEETLQNAKS DLDLAKAQSE 
LATAMAQLEA IQRLAKIRSR H