Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6753 |
Symbol | |
ID | 6181658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010553 |
Strand | - |
Start bp | 237625 |
End bp | 239577 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641685499 |
Product | site-specific recombinase, phage integrase family protein |
Protein accession | YP_001812404 |
Protein GI | 172064754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG CCTCTGCCTC GGTCCTTGAT ACGCCACGCG AACACGCTGG GGTCCTGGTC GTGCCGGTCG GCTCTACGCC CGCGCCACGT GCCGTGCGTG CCGTCGAGTT GCTGGCGGCT CAGCCGATCA GCTTGGTAGG CATCCCGCCG GCTGAGCGTG ACGTCATCGT GGTGACTGCC GTGGCTGATG CCGCTGGCCA CGAGCACCCA GTGAGCCGCT TCGGCGACCG CGTCTGGGAC CTCGCGTCGG AGGTCGAGGC GAAGAACCGC AAGGGTTCGG CCTCGAAGAT TGTCTGGCCG GGCGATGTGC CGAACGCGCT GGTCGACGAT GCCAAGGCGG CACTCTACTG CGCCCAGCGA CGCGGCCCCC GTGGGCGGCA GTGGTCGGGT AGCTCTATTG CGGAGATTGG CCACAGGGCC GTCCAGGTGC TGAGGCACCT CGCACAATTG GGGCTGGGCG ACTTCAGTCA GGTACGAGCG CTGCACCTGT CTGACCACAT TACGGATCTG CGGCGCACGC TCAAGCCGGT GTCCGTGCAT AAGCGGCTGC AGATTATCGA CCTCGTGTGG TCATTCCACA TGGAAGTCTT GCATCCGTTG CTCGAGCACC CGTGGATGGG GCTTGCCCTC TGGGATGTAT GTGGTGGCAA CGAGGGCGAC CGGGGGCCAT CGGGCCGCAC CGGCATGACC CCAGTGATTC CGCGCTCGGT GCAGCGCATA CTCTTTGCTC ACTGCGAAGC CAGCCTCGCT CAGGCAGAGG ACCTGTTCCG AGCTCGAGAC GCGGGTGAAG TTGGAGTTCC CAATCGCGCC GCGCTCACCG CGATCCGCAA TGCGGTCTTG TATCTGCTGC AGATCTCTTC GGGAATGCGT AACTCGGAGA GCACCGGCGT CACCAGCGGG TGTTGGCGCA CCGAACAGCG CAACGGCGTG ACGTATCACT GGGTGCGCAC GCGCGAGATC AAGACGACCG GCGGAACCGC GGTCGACTTC CTGGTGACCC CGGAGGGCAT CCGCGCGCTC GAGATCCTGC AGCGCTACGC CGAACCGCTT CAGGCGCGGT TGGCCGACGA GGCACGATGG CTCGAAGAGA TGCTAGCACA GGGCTCCGAT CTCACCGGTC ACCTGGGCAA CGGCATGAAA ATAGCTGAGG CCGCGCACCG CCTGAACCAT GTGCGTGGGA TCGGCCGGCA TCTGATGTTG GGTCTGAACG TGAAAGCCTC TGACCACTTG GGAACTGGGT CGCGGGTCGA GGTGCTGAGT TCAACCTCGT GCGCCTACCA ATTGAAGCAA CTGGCCGCGG CTGCCGGGAC GGAGTGGGAT CTGGCCAACC ATCAGTGCCG TCGCACCTTC GCGTACAACG TCGCAAACTC GCGTCTGGGG CGAATGGGCC TCGTCTTCCT GAAGTGGCAA CTCAAACATG CATCGATGTC GTGGACGCAG CTTTACGCTG CCAGCCCCTA CCAGGATCAC GCGCTATATA GTGAGTTCGA GGAGGAGATG TTCGAGGCGC GGCTGGGGCT GCTGGAAGGT TGGGCGCATC CCGATGCACT GCTTAGCGGG GGCGCCGGGA AGAAGATCAT GGAGACGCGG GCTCGTGCCG CACGAGACAT CAGGCAGCTC CTGAGACAAA CGGCCGAGTC GGTCGAACTG CGCAGCACCG GACACGCATG GTGCATCAGT GGCACGCGCG GCTGCCACGG CCAAGGGGTA TACGATTCAT CAATGTGCGG TGGTTGCTCG CAGGCCATCA TCGACCAGGG GCAAGCATCT GCGTGGCAAA TGATCCACCT GGACAACCTG CGGCTAGCGG CGATTACCGA TTGCGGTCCC GCCGTGGTCG ACAAGGCGCG GCGGGCGGTC GAGCGCTCGA AGCAGGTGCT GCACGATCTT GGCTGCGCGC TGCCGACCGA TGACCAGGGT CGGGCGTACA CGGCCGCGCT GGAGGGCGAA TGA
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Protein sequence | MSDASASVLD TPREHAGVLV VPVGSTPAPR AVRAVELLAA QPISLVGIPP AERDVIVVTA VADAAGHEHP VSRFGDRVWD LASEVEAKNR KGSASKIVWP GDVPNALVDD AKAALYCAQR RGPRGRQWSG SSIAEIGHRA VQVLRHLAQL GLGDFSQVRA LHLSDHITDL RRTLKPVSVH KRLQIIDLVW SFHMEVLHPL LEHPWMGLAL WDVCGGNEGD RGPSGRTGMT PVIPRSVQRI LFAHCEASLA QAEDLFRARD AGEVGVPNRA ALTAIRNAVL YLLQISSGMR NSESTGVTSG CWRTEQRNGV TYHWVRTREI KTTGGTAVDF LVTPEGIRAL EILQRYAEPL QARLADEARW LEEMLAQGSD LTGHLGNGMK IAEAAHRLNH VRGIGRHLML GLNVKASDHL GTGSRVEVLS STSCAYQLKQ LAAAAGTEWD LANHQCRRTF AYNVANSRLG RMGLVFLKWQ LKHASMSWTQ LYAASPYQDH ALYSEFEEEM FEARLGLLEG WAHPDALLSG GAGKKIMETR ARAARDIRQL LRQTAESVEL RSTGHAWCIS GTRGCHGQGV YDSSMCGGCS QAIIDQGQAS AWQMIHLDNL RLAAITDCGP AVVDKARRAV ERSKQVLHDL GCALPTDDQG RAYTAALEGE
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