| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6570 |
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| Symbol | |
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| ID | 6181624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 60219 |
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| End bp | 61100 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641685339 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_001812244 |
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| Protein GI | 172064594 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC TCCGTACCCT TGCTGCGTGC GGCGCAGTCG CGATGATCGC GACGGCCAGC
GCTCTTGCGG CAAAGCCCGC GTCGCCAGTG CTTCCACCGA CACCGAACTT CGATTTTGCG
ACGATCATCG GCGATCCGAT GAGTCCGGTG AATCCGTACA ACTCGGGCAC AGATCCGATC
ACCATGCCGG GCGATGCGCG CATGGCCGTG TTTCCGTACA GCCGCGACCA GATCTTCCGC
GTCATGACGG CACCGCTCAA GGTGACAACG ATCGAGCTCG CGCGCGGCGA GGTGCTGACC
GCGGAGCCCG CGCTCGGTGA CTCCATCCAA TGGGTGCTCG ATACCGACGG CGCGAATCAC
GTTTTCGTGA AGCCGACCAA ACCGGGCCTC GTGAACACGC TGCACTTGAC CACCAACATG
CGCGAGTACG ACATGACGCT CGTGTCGTCG CCGGTCGGCG GCCTGTTCTA CCAGTCAGTC
CGCTTCAACT ATCCGAATTC GCTGATGGCG AAAGTTCGTG CGCGCGAGGG TGGCGGCAGT
GACAGCGCGG AAGGCAACCT GCCAGGTGTC GCTGCGCAAA CGGACTCCGG CCCGATCGGC
GTGACGCCCG ACAAGCTGAA TTTCGAGTAC ACCGTGTCCG GGTCTGGCGC GATCAAGCCG
GAGACCGTGT TCGACGACGG CAAGTTCGTC TGGATTCGTT TGCCGCAAAA CGCGCCGTTC
GCCGTGCCCA CGGTAAGAGA GGGCGGAGAC ATCGTCAGCC CCAACTTTAT CCGGCGTGGG
CCATACATCG TTGTCCAGCA GCTGGCGGAC GAAATTACGC TGACGCGCGC GGGCGAAGTG
GTCACGATCA AGCGTGGCCG CCGCGGCCTG TTCGGTTTCT GA
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| Protein sequence | MKRLRTLAAC GAVAMIATAS ALAAKPASPV LPPTPNFDFA TIIGDPMSPV NPYNSGTDPI
TMPGDARMAV FPYSRDQIFR VMTAPLKVTT IELARGEVLT AEPALGDSIQ WVLDTDGANH
VFVKPTKPGL VNTLHLTTNM REYDMTLVSS PVGGLFYQSV RFNYPNSLMA KVRAREGGGS
DSAEGNLPGV AAQTDSGPIG VTPDKLNFEY TVSGSGAIKP ETVFDDGKFV WIRLPQNAPF
AVPTVREGGD IVSPNFIRRG PYIVVQQLAD EITLTRAGEV VTIKRGRRGL FGF
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