| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6505 |
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| Symbol | |
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| ID | 6181541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 4245 |
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| End bp | 4979 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641685274 |
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| Product | hypothetical protein |
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| Protein accession | YP_001812179 |
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| Protein GI | 172064529 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC GTTACTTTCG CGCGGCGGCG GCCGCCGTCA TGTTGGTCGT GGCCGGAAGC
GCGTCCGCGT CGGGCATGCC TGTGTTCGAT GCGGCCAACT TCGCGCAGAA CATCATCACG
GCCGCGAAGG CTGTGCGTGG CGAGATCTAC CAGAACACCA ACATCATGTA CCAGTACCAG
ATGATGGCGA ACCAGCTGTT GCAGGCAAAG AATCTCGATC CAGCCGCGTG GAAGGCCGCG
TATGACCAGA TCGCCGGCGA CATCAACAAG GTCAAGACTC TGGTCGGGAC CATGCAAGAC
CTGTATGGCG ATCTGAAGCA GGGGCGTGAG TGGGTGTCTC AGGTGCAGAC CTTGGTCAGT
CGGTCAGGCA AGACCAATGA GCAGTGGTTC GCCGACATGA ACACGCTCTA TCAGCAGAAC
GACAAGGTGG TGCGCAACCT GTTCCAGATG GGATCGAACA TCATGCAGCA CACGAACGAT
CTGGCGAAGC GCCGACAAGA GCTGCAGTCT CAACTGTCGT TGTCGCCAAC CGCGCAGGCG
ACGGCGGAGA TCACGACGCA TTACCTCGAC ATCGTGACGA GCCAGAACGC CGACATTCTT
CAACTGAATG CAGCGAAGGC GCAACGCGAC TCGCAGAAAG ATGCGCAGCA GGTTGAAGAC
GACAAGGAGA AGGCGGCGGA CGCGAACCGC TTCATTTCGA AGCAGCAGGC CGAGCGGTCG
GCATATGGCT TCTGA
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| Protein sequence | MNIRYFRAAA AAVMLVVAGS ASASGMPVFD AANFAQNIIT AAKAVRGEIY QNTNIMYQYQ
MMANQLLQAK NLDPAAWKAA YDQIAGDINK VKTLVGTMQD LYGDLKQGRE WVSQVQTLVS
RSGKTNEQWF ADMNTLYQQN DKVVRNLFQM GSNIMQHTND LAKRRQELQS QLSLSPTAQA
TAEITTHYLD IVTSQNADIL QLNAAKAQRD SQKDAQQVED DKEKAADANR FISKQQAERS
AYGF
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