| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6396 |
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| Symbol | |
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| ID | 6182541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1000855 |
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| End bp | 1001931 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641689520 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001816379 |
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| Protein GI | 172065667 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.210814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0991035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCG ATTCCGCTTC ATCGTCCGGC CCGAGCCGCA TCGCGGTATT TCGCGCGCTG
CAGCTCGGCG ACATGCTGTG CGCGGTGCCG GCGCTGCGCG CGCTGCGGCG CGGCGAGCCG
GATGCGCGCA TCACGCTGAT CGGGCTGCCG TGGGCGCGCG AATTCGCGTC GCGCTTCTCC
GACTACATCG ACAACTTCAT CGCGTTTCCG GGCGCGCCGG GCCTCGGCGA ACAGCCGGAA
GCCGACGCAG CCGCGCGCGA GGCGTTCGTC GCGGAATGCC GTGCGCGCGA CTTCGATCTC
GCGATCCAGC TGCACGGCAG CGGCGCGCAG ACCAACGCGA TCGTCGCGTC GCTCGGCGCG
ACGCGCACCG CCGGCTTCGT GCCGCCCGAC GGCGGCGCGA CCGCGCTCGA CTGCCAGGTT
CCCTGGCGTG ACGGCGAGCC CGAGGTCACG CACTGCCTGT CGCTGACGCG CAAGCTCGGC
TATCCGGACT GGGGCGACTA CCTCGAATTC CCGCTCGGCG GGCTCGACTA CGCGCTCTGG
CATGTGCTGT GCGAAGAACA CGCGCTCGAT CCGGGCCGCT ACGTGATCGT CCATCCGGGC
GCGCGGATGG CGTCGCGGCG CTGGCCGGTC GAGCGTTTCG CGAACGCCGC GCGGCAGCTC
GCGGCCGACG GCTGGCAGAT CGTGCTGACC GGCACGCGCG CGGAAATCGC GCTGGCCGCC
GCATTCGCCG AGCAGCTCGG GCGACCGTGC GTGAACCTGT GCGGGCGCAC GCCGCTCGGC
GCGCTGGCCG CGCTGATCGG TCGCGCGCGG CTGCTGCTGT GCAACGACAC GGGCGTGTCG
CATGTCGCGG CGGCGCTCGG CACGCCGAGC ATCGTCGTCG CCTGTGGCAG CGATACGGCG
CGCTGGGCGC CGCTCGATGC CGACCGTCAT CGCGTGATCG CGAACTACCC GGCTTGCCGG
CCGTGCATGT TCGACACCTG CCCGTACGGG CACGAATGCG CGAATGCGAT CGGCGTCGAC
GACGTGATGG AACGGGCGGG CGCACTGCTC GCGGAGGAGA GACGTCATGT CACGTAA
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| Protein sequence | MSFDSASSSG PSRIAVFRAL QLGDMLCAVP ALRALRRGEP DARITLIGLP WAREFASRFS
DYIDNFIAFP GAPGLGEQPE ADAAAREAFV AECRARDFDL AIQLHGSGAQ TNAIVASLGA
TRTAGFVPPD GGATALDCQV PWRDGEPEVT HCLSLTRKLG YPDWGDYLEF PLGGLDYALW
HVLCEEHALD PGRYVIVHPG ARMASRRWPV ERFANAARQL AADGWQIVLT GTRAEIALAA
AFAEQLGRPC VNLCGRTPLG ALAALIGRAR LLLCNDTGVS HVAAALGTPS IVVACGSDTA
RWAPLDADRH RVIANYPACR PCMFDTCPYG HECANAIGVD DVMERAGALL AEERRHVT
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