| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6364 |
|---|
| Symbol | |
|---|
| ID | 6182622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 967186 |
|---|
| End bp | 967881 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641689488 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001816347 |
|---|
| Protein GI | 172065635 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.1144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGA AATCCCTTCT TGTTATCGGT GTAACCGTGC TGCTGGCGGC TTGCGCTTCA
CAAGGCCCGA CGTGGAATGC GTATCGCGTC AGCATGCCGA ATGGGCAACA GGCATACCGC
GTCGATTGTC ATGGTCTTTT TGAAGGGCAG GAAGCGTGCT ATTCCGAAGC GGTGGAAATC
TGCGGCAAAA AGCAGGTGCA GCCGCTCGAA GCAGTCGCAC CGCTGGGTGA CGAGCAGAAT
CCGCGGGACG TGCGAATCCT GACGTTCCAG TGCGCGACGC CGGCTCAGCC CGCGCCGCCG
GCCGCGGTAA AACCGGCGCC GATCCCGGCG CCTGTCGCGG CTGCCCCTGT TACCGCGAAG
CACATCACAC TCGACAGTGA CGCCAACTTC GACACCGACA AATCGACGCT GAAGACGGAT
GCTCGCGACA AGCTCGATGT GCTGATCGAA GCGGCACACG GTACACCATT CAAAACCGTG
ACGATCAGCG GCTATACCGA CTCGACCGGC ACCGCCGAAC ATAATCAACA GTTGTCGCAG
CGGCGCGCTC AATCCGTTGC GCAATATCTG CGTGAACATG GCCTGTCGGC ACAGAAATTC
GACGTGCGCG GCTACGGCGA GAACAACCCC GTTGCGAGCA ATGCAACACC GGCCGGACGC
GCGAAGAATC GCCGCGTGGA CATCACGCTC GAATGA
|
|---|
| Protein sequence | MSAKSLLVIG VTVLLAACAS QGPTWNAYRV SMPNGQQAYR VDCHGLFEGQ EACYSEAVEI
CGKKQVQPLE AVAPLGDEQN PRDVRILTFQ CATPAQPAPP AAVKPAPIPA PVAAAPVTAK
HITLDSDANF DTDKSTLKTD ARDKLDVLIE AAHGTPFKTV TISGYTDSTG TAEHNQQLSQ
RRAQSVAQYL REHGLSAQKF DVRGYGENNP VASNATPAGR AKNRRVDITL E
|
|---|
| |