| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6208 |
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| Symbol | |
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| ID | 6181999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 795284 |
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| End bp | 796777 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689336 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001816195 |
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| Protein GI | 172065483 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.842439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.408471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCAG CCGCGCTTCC CGGTCGCTTT CACGTTGCCG TCGCTCGACA CGCGTGTGCC
ATTGCGCTGG CGACGGGCAT GGTGTCCCTT TCGGGATGTC TGTCGCTCGC GCCATCGGAC
GAGCATCCCG CCGCACCGAT TCCCGCGTCG TTTCCGGATC CGGCCGCCGA CGAGACACCG
GCCGCGCAAG TGCCCGAGTG GCAGGCCTAC TTCGTCGACG CCCGCCTTCG CGCGTTGATC
GGGCAGGCGC TCGCCAACAA TCGCGATCTG CGCGCGGCCG TTGCACGGGG CGCGCAGGCA
CGCGCGGTTT ACGGCATCCG CAGCGCGGAT CAATGGCCGA CGGTCGATGG GGGCGCGGCC
TATGCGCGGT TTCGCACACC GGGCGGTTTT CTCACGCCGG CGCCCATGAT CGGGCAGGTC
TACGAAATCC AGCTGGCCGA GACGCAATGG GAGCTCGATT TGTGGGGCCG CGTGCGCAAC
ATGAAAGAAG CGGCGCTCGA GCGCTACCTC GCGAGCGACG CGGCCCGGCA GGCCGTGACG
CTCAGCATCG TCACCGGCGT AGCCGACGCG TATCTGACCC TGTGCGAGAT CGATGAACGC
ATCGCGCTCA CCCGCGCGAC CATCGATACA CGCCGCGAGT CATTGCGGAT TTTCCGGCTT
CGCCATGCGG CCGGCGCGAT CTCGCGGCTC GACCTGACGC AATCCGAGAT CCTGCTGCAA
CAGGCGCAAT CCCTCGGCAC CCAGCTACAG CAGGCACGCG CGTCGGCTGC CGATGCGCTG
GCACTGCTGG TCGGCGCGCA GCCGGATCTG CCCGACGCGC CGCTCGCGCT CGACGACGGC
GCCGTAACGC CGACGCTTGC CGCCGGCCTG CCCTCCTCGC TGCTGACCCA TCGCCCGGAT
GTGATTGCCG CCGAGCACGA GTTGCGGGCG ACGCACGCGA ACATCGGCGC GGCGCGCGCG
GCATTCTTTC CTCGCATCGC GTTGACAAGC TCGATCGGCT CGGGAAGCAG CGCGCTGCAC
GACCTGCTGT CGTCGGGCAC CGGCGCATGG TCGCTCATCC CCAACGTCAC GCTTCCACTC
ATCGACGGCG GCCGCAACCG GTCGAATCTC GCGCTCGCGC GCGCGCAGCG CGACGAGGCG
CTCGCGCAGT ACGAAAAGAC GTTGCAGCGT GCGTTCCGCG ACGTGTCCGA CGCGCTCGCG
GCGCGTCATT GGCTCGCCGA TCAGGTCGCG ATCGAGCGTG CGACGCTGGC ATCGCAGGCC
GAGCGGGCGC GCCTCGCGAA GCTGCGCTAC GACAGCGGGG CAACGCGCTT CCTCGAAGTG
CTCGACGCAC AACGGGACCT GATGAACGCC GAGCAGCAAC TGGTCATGAC GCGCCGCGCG
CTGCTGTCGA GCCGCATCGC GCTATACGGC GCGCTTGGCG GCGGGATGAC CGACACCGGC
ACGGCTGCCG CGGCACGCAC TCCTCTTTCG ACTGATTCGG AACCCACACC ATGA
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| Protein sequence | MRAAALPGRF HVAVARHACA IALATGMVSL SGCLSLAPSD EHPAAPIPAS FPDPAADETP
AAQVPEWQAY FVDARLRALI GQALANNRDL RAAVARGAQA RAVYGIRSAD QWPTVDGGAA
YARFRTPGGF LTPAPMIGQV YEIQLAETQW ELDLWGRVRN MKEAALERYL ASDAARQAVT
LSIVTGVADA YLTLCEIDER IALTRATIDT RRESLRIFRL RHAAGAISRL DLTQSEILLQ
QAQSLGTQLQ QARASAADAL ALLVGAQPDL PDAPLALDDG AVTPTLAAGL PSSLLTHRPD
VIAAEHELRA THANIGAARA AFFPRIALTS SIGSGSSALH DLLSSGTGAW SLIPNVTLPL
IDGGRNRSNL ALARAQRDEA LAQYEKTLQR AFRDVSDALA ARHWLADQVA IERATLASQA
ERARLAKLRY DSGATRFLEV LDAQRDLMNA EQQLVMTRRA LLSSRIALYG ALGGGMTDTG
TAAAARTPLS TDSEPTP
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