Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6156 |
Symbol | |
ID | 6182313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 739791 |
End bp | 740717 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641689284 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001816143 |
Protein GI | 172065431 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTC CCGTCCATCT CAACGCATTA CGGGCCTTTG AGGCCAGCGC CCGCCACCAG AGCTTCTCCG CGGCTGCGGT GGAACTGAAC GTCACACCGG CAGCGGTCGG GCAATTGGTG CGCACACTCG AGGATTGGTT GGGCACGCCG TTGTTTCTTC GAAGCACCAG CGGGCGAGCG AGGCTCGTCC CCACGGAGAT GGCCGAACGC GCGTTGCCGG ACATCAGGGC CGGTTTCGAC CGGCTGACGC TGGGTTTGGA GCGGTTGCAG GAGATCTCGA CCAGCGGTGT GCTCACCGTG ACGGTCAGCC CGGCCTTTGC CGCGAAGTGG CTGCTACCCC GCATCGATCG GTTCCAGGCC GCATGGCCCG ACACGGACGT GCGCCTGGAT ACGAACCATA AGTCAGTCGA TTTCGTGGCC CAGCGGATCG ATATCGGTGT GCGCTATGGG ATAGGAAGCT GGTCGGGCCT CAAGGCTGAC AAGCTGATGG ACGAGGAGGT TTATCCGGTG TGCTCACCGG AACTGCTGCG GCAGCATTGG CGTCTGCGCA AACCGGCTGA CATCGTGCGC GAGACCTTGA TCCACGATTT GTCGATGGAC GGCCACGCAG GCTTTCCGAC CTGGGAGGTA TGGATGAAGA AAGCGGGTGT GACGAACGCG CCTCCCACGC GCGGCATGCA GATCAACAAT TCCGCCGCGG TGCTCCAGGC TGCGATCGAG GGACACGGCA TTGCGCTCGC ACGCAGCGTC ATGGCGCGGG ATGATCTCGC GAGCGGGCGA TTGGTTCGAT TGTTCCCGGA TATCAGCGTT GCATCCGAGT TGGCCTACTA CGTCGTTTAT CGGCCGGAGT GCGCCAGCTT GCCGAGATTG GTCGCCTTTC GTGACTGGTT GCTCGCCGAG GCGCAGCATG ACGGAACAAG TCCCTGA
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Protein sequence | MKSPVHLNAL RAFEASARHQ SFSAAAVELN VTPAAVGQLV RTLEDWLGTP LFLRSTSGRA RLVPTEMAER ALPDIRAGFD RLTLGLERLQ EISTSGVLTV TVSPAFAAKW LLPRIDRFQA AWPDTDVRLD TNHKSVDFVA QRIDIGVRYG IGSWSGLKAD KLMDEEVYPV CSPELLRQHW RLRKPADIVR ETLIHDLSMD GHAGFPTWEV WMKKAGVTNA PPTRGMQINN SAAVLQAAIE GHGIALARSV MARDDLASGR LVRLFPDISV ASELAYYVVY RPECASLPRL VAFRDWLLAE AQHDGTSP
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