Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6037 |
Symbol | |
ID | 6181854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 598139 |
End bp | 599041 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641689167 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001816026 |
Protein GI | 172065314 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.941507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCG ATCTCGGCGA TCTGAATGCG TTCGTGGCGG TGGCGCGCGC GAAGGGCTTT CGCGAGGCTG CGCGCCTGGC CGACGCGAGC GCGTCGGGGC TCAGCGAAGC GGTGCGCCGG CTGGAGGCGC AACTGGGTGT GCGGCTGCTG CACCGCACGA CGCGCAGCGT GTCGCCGACC GAAGCCGGCG CGCGTCTGCT CGCGCGGCTC ACGCCGGCGC TGAGCGAGGT GGAGGCGGCG CTCGACGTGG TGAACACGTT CCGCGAGAAG CCGGTCGGCA CGCTGAAGCT CAACGTTCCG ATGAGCGCGG CGCGGCTCGT GCTGCCGTCG ATCGTCCCGC GCTTTCTCGA CGCGTATCCG GAGATACGGC TCGAGGTCGT GGCCGACGAA AGCTTCGTCG ATATCCTCGC GGCCGGCTGC GACGCCGGCA TTCGCTACGA CGAGCGTCTC GAACAGGACA TGATCGCCGT GCCGATCGGC CCGCGATCGC AACGCCTCGC GACCGCCGCG GCGCCCGCCT ATCTCGACCG GCGCGGCCGC CCCGCCCATC CGCGCGACCT CCTCGATCAC GCGTGCCTGC GCGGCCGCTT CGCGAGCGGC GCGATGCCGG CGTGGGAATA CGAGCGCGAC GGCGAAGTGG TGCGCGTGGA GCCGTCGGGC CCGCTCGTCG TGCAGATCGG CGGCGCCGTC GATCTCGTCG TGGACGCGGC CTGTGCGGGG CTCGGCATCG TGCATCTGTA CGAAGACTGG CTGCGCCCGT ACTTCGCGAG CGGCGCGCTC GAGCCCGTGC TCGACGGCTG GTGGCGGCCG TTCTCGGGGC CGTATCTGTA CTATCCGGGG CGGCGTTTCG TACCGGCTCC GCTGCGCGCG TTCGTCGATT TCATCAAGGC CGAGGCGGGA TAG
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Protein sequence | MQVDLGDLNA FVAVARAKGF REAARLADAS ASGLSEAVRR LEAQLGVRLL HRTTRSVSPT EAGARLLARL TPALSEVEAA LDVVNTFREK PVGTLKLNVP MSAARLVLPS IVPRFLDAYP EIRLEVVADE SFVDILAAGC DAGIRYDERL EQDMIAVPIG PRSQRLATAA APAYLDRRGR PAHPRDLLDH ACLRGRFASG AMPAWEYERD GEVVRVEPSG PLVVQIGGAV DLVVDAACAG LGIVHLYEDW LRPYFASGAL EPVLDGWWRP FSGPYLYYPG RRFVPAPLRA FVDFIKAEAG
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