Gene BamMC406_6030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6030 
Symbol 
ID6181847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp588827 
End bp589915 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID641689160 
Productaldose 1-epimerase 
Protein accessionYP_001816019 
Protein GI172065307 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.808799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCG ATATCGCCAC TTCCCGCCCG GCGGCCGAGC TCGGCCGCAT TCCGTCCGAG 
CCGTGGGGCA CGCCGCCCGG CGGCGATCCG GTGCGGCGCT ATACGCTGCG CAACGCGCAC
GGAATGCGCG TCGTCGTCAG CGATCTCGGC GCGACCGTCA TGTCGTGGCT CGCCCCCGAC
CGCACCGGGC GCTTCGCCGA TATCGTGCTG GCCCATGACA CGCCGACCGA TTACATCGAC
TCTGGCGCGT ACCTCGGCGC GACGGTCGGC CGCTGGGCGA ACCGGATCGC GGCTGCGCGC
TTCACGCTCG ACGGCGTCGA CTACACGCTC GACCGCAACG AGAACGGCAA CCTGCTGCAC
GGCGGCGCGA GCGGCTTTCA TCGCGCGCGC TGGGACGTGA TCGACGACCA CGGCGGGTTG
ACGCTGCGGC TCGATTCGCC GGAAGGCGAT GCCGGGTTCC CCGGCAACGT AAGCGTGCAG
GTGCGCTACA CGCTCGACGA CGACGGCACG CTGACGATCG ACTATACGGG CGTGACCGAT
GCGCCCACGC CGTTGAACCT GACGAATCAC AGCTACTTCA ACCTGAGCGG ACGCGCGGGC
AGCGACGTGC GCGGGCATCT GCTGCAGATC GACGCCGATG CGTTCGTCGA AGTGGACGAC
GCGCTGATCC CGACCGGCAC GGCCGACGTG ACGGGCAGCG CGTTCGATTT CCGGCAGAGC
GCGCCGATCG GCGCGCGCCT CGACTGGCCG CATGCGCAGC TCGCACGCGG GCGCGGCTTC
GACCACTGCT ACGTGCTGCG CGACTTTGGG CGCGGCGTGC GGCCCGTCGC GGCGATCTAC
GATCCGGAAA GCGGCCGGGA GCTCGCCGTA TCGACGGATC AGCGCGGGCT GCAGCTCTAT
ACGGGCAACT ATCTGGACGG TTTGCGTGCA AGCGGCGGTG TGTCGTGCGT GCAGCATGCG
GCGCTGTGCG TCGAAGCCGG ATTCTTTCCG AACCAGGTCA ACATGAACGC GCTGCGTGAC
GAAACCATCC TCCAGCCGGG CGACACCTAT CGCCAGACGA CGCGGTATCG GGTAGGCGTG
CGCGCGTAG
 
Protein sequence
MPIDIATSRP AAELGRIPSE PWGTPPGGDP VRRYTLRNAH GMRVVVSDLG ATVMSWLAPD 
RTGRFADIVL AHDTPTDYID SGAYLGATVG RWANRIAAAR FTLDGVDYTL DRNENGNLLH
GGASGFHRAR WDVIDDHGGL TLRLDSPEGD AGFPGNVSVQ VRYTLDDDGT LTIDYTGVTD
APTPLNLTNH SYFNLSGRAG SDVRGHLLQI DADAFVEVDD ALIPTGTADV TGSAFDFRQS
APIGARLDWP HAQLARGRGF DHCYVLRDFG RGVRPVAAIY DPESGRELAV STDQRGLQLY
TGNYLDGLRA SGGVSCVQHA ALCVEAGFFP NQVNMNALRD ETILQPGDTY RQTTRYRVGV
RA