| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6021 |
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| Symbol | |
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| ID | 6181838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 577759 |
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| End bp | 578379 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689151 |
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| Product | porin |
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| Protein accession | YP_001816010 |
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| Protein GI | 172065298 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.852349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCCTG GAAAGCAGGG CGGCCTGCTG GTCGGCGCGG CATTCCTGAA TGCGGACAAC
CCCGGTGCGA CGGCCAGCGG TGCGATCGCG GGCCCTGGGT CGGTCGGGGC GGATGCGAAC
TTCGCGTCCG CGCGGCTGCG GATCTTCGGC GCCGGCATCA ACTACACGGC CGGGCCCGCG
ACGCTCGGGT TCGCGTACAC GAACAGCAAC GTCACGCGGC CGACCGCGAA CGTCGGCTAC
CTGTTCGGCG ACGAGACGAT CGAACCCGTC GCGGGGCCGC TCGCGGGCGG CACGGTCACG
GCGATCAAGT ACCAGAACTT CGAAGTGAAC GGCAAGTATC AGTTCACGCC GGCGTTCTTC
GTGGGCGCGC AGTATGTGTA TACGACCGTG CGCTACGACG CGACCACGGG CAGCGCGAAA
CCGAAGATCC ATTCGATCGG GCTGATGGCG GACTACAACC TGTCGAAGCG CACCGACGTC
TACCTGATGG GTGCGTACCA GCGGGTTGCC GGCGCCGCGA CCGGCTCGTC GCTCGATCAG
GCGTATATCC CCGGCGCGGC CGATCTGTCG TCGACGTCGA AGCAGGTGAT GGTGCACGCG
GGGATCCGTC ACAAGTTCTG A
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| Protein sequence | MRPGKQGGLL VGAAFLNADN PGATASGAIA GPGSVGADAN FASARLRIFG AGINYTAGPA
TLGFAYTNSN VTRPTANVGY LFGDETIEPV AGPLAGGTVT AIKYQNFEVN GKYQFTPAFF
VGAQYVYTTV RYDATTGSAK PKIHSIGLMA DYNLSKRTDV YLMGAYQRVA GAATGSSLDQ
AYIPGAADLS STSKQVMVHA GIRHKF
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