Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5960 |
Symbol | |
ID | 6182252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 509744 |
End bp | 510550 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689090 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001815949 |
Protein GI | 172065237 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGA CCAGGCGCCG GGAGGCAATG CTGCAGGCCG TACTCGGGGG CATGACGGAC GTTGCGACGT TGTGCGAGCA CTTCGGGATG TCGGAAGCAA CCGTTCGCCG GGATCTGCGT GCGCTCGCGA GCGACCGTCG CATTCTGCGC ACCTACGGCG GTGCCGCCGC GGTGGGCGGC CATGAGCCGG AGCCCTCGCT CGAGGAGCGG CGCGTCAGTT CGCAGGAACA GAAGGAAGCG ATCGCGCACA CGGCAAGCGC GTTCGTCGAG GACGGCGACA CCGTATTCCT CGACGGCGGC ACCACGACCG CGGCGCTGGC GCGCCTGCTT GCCGGCCGGA CAGCCGTTCA CGTCGTCACC AACAATCTGC TGGTCGTCAG CCCGCTCGCC GCGTCGGGCG TGCGGGTGAC GGTGATCGGC GGCGACGTCC GGTCGTCCAG CATGAGCACG CTCGGGCCGC TCGCACAGAT CGCGCTGAGC CGCCTGAGCG TCGACAAGGC GTTCCTCGGC GCGGATGGCG TGGTCGCCGA ACTCGGCTTG TGCGAGGCGA GCAGCGAACA GTCGTATCTG AAGGAATGCG TGATGCGGCA GGCAGCCGAG GTCTTCGTGC TCGTGACCGC GGACAAGCTC GGACGCGCGA GTCAGCAGCA CTGGACGCCG CTCGAGCGTG ACTGGACGCT CGTGACGGAT GATGCGGCCC TGCCCGAGCA GCTCGAGCGG TTTCATTCGC AAGCGCGGAT CACCGTTCAC GCGGTCAGCA CGAAGACTGC GGCGCCATCC GGCGGTTCAT CGCAGGTTCA AACGTAG
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Protein sequence | MKVTRRREAM LQAVLGGMTD VATLCEHFGM SEATVRRDLR ALASDRRILR TYGGAAAVGG HEPEPSLEER RVSSQEQKEA IAHTASAFVE DGDTVFLDGG TTTAALARLL AGRTAVHVVT NNLLVVSPLA ASGVRVTVIG GDVRSSSMST LGPLAQIALS RLSVDKAFLG ADGVVAELGL CEASSEQSYL KECVMRQAAE VFVLVTADKL GRASQQHWTP LERDWTLVTD DAALPEQLER FHSQARITVH AVSTKTAAPS GGSSQVQT
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