Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5448 |
Symbol | |
ID | 6181363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2687120 |
End bp | 2687986 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641685203 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001812108 |
Protein GI | 172064457 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.778769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCGAC CTTTGTTCGA CCTCGACCTG TTGCGCGCAC TCGTGATGGT CGCCGATTGC GGCAGCTTCA CGACCGCGTC CGCGCGGCTG CATTCGACGC AGTCGACGGT CAGCCAGAAG GTGCGGCGGC TCGAGGAGAT CGCCGGGCAT CGCCTGCTCG ACCGCGGCAC GCGCGACGTG CGGCCGACCG ACGCCGGCGT GACGGTGCTC AGCTACGCGC GGCGCATGAT CGCGCTGAAC GACGAGATGC TGGAAGCGCT GTCGGGCGCG ACCGTCGCGC TCACGATCCG GCTCGGCGTA CCCGACGATT TCGCGGCGGG CCGCACGACC CACGCGCTCG CCGCGTTCAA GCGCGATCAT CCGCAGGTGA AACTTGAGGT GACGTGCGGG CTGAGCCGCG ACATCTGCGC GGCCTACGAT CGCGGCGAGC TCGATCTCGT GCTGATCAAG CAGCGGCGCG ACAGCCGCGA GGCGGTGGTG CGCTGGCCGG AGAAGCTGCG CTGGATCGAC AGCGCGCGGC ATCCGACGAT CGAACTCGAC CCGGTGCCGC TCGTCGTGTT TCCGCCGCGC GGGCTCTATC GCGACGACAT GATCAAGGCG ATCGAGGAGC GCGGCCGCCG CTGGCGGATC AGCTTCACGA CGTCGAGCCT GAGCGGCATC CAGGCGGCCG TCGCGGACGG GCTCGGCATC AGCGTGCTGC CCGCGCGCGC GGTGACCGAC GACCACGTGG TGCTGACCGA CGAGCACGGC GGCTTCGCGC CGATCGAGAA CATGGACATC GCGATCCTGC ATCGGCCGAC GGCCGATCCG ATGGTCAGCG AACTGACGAA GGCGCTCGCG GCGATGCTGG AACACGAGCC GGAATAA
|
Protein sequence | MNRPLFDLDL LRALVMVADC GSFTTASARL HSTQSTVSQK VRRLEEIAGH RLLDRGTRDV RPTDAGVTVL SYARRMIALN DEMLEALSGA TVALTIRLGV PDDFAAGRTT HALAAFKRDH PQVKLEVTCG LSRDICAAYD RGELDLVLIK QRRDSREAVV RWPEKLRWID SARHPTIELD PVPLVVFPPR GLYRDDMIKA IEERGRRWRI SFTTSSLSGI QAAVADGLGI SVLPARAVTD DHVVLTDEHG GFAPIENMDI AILHRPTADP MVSELTKALA AMLEHEPE
|
| |