| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5337 |
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| Symbol | |
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| ID | 6180519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2559274 |
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| End bp | 2560527 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641685092 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001811997 |
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| Protein GI | 172064346 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.306348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TCGTCTGCGG CGCGAACGGG TTCATCGGGC GGGCGTTGTG CGCGCGGCTG
GAAGCCGGCG GCCATCGCGT GCTGCGCGGC GTGCGGCACG CAGTCGGCCC GCACGATGTC
GCGATCGACT TCGCGACGGA CGTCGACCCC GACGCGTGGC TGGCCCGGCT GGCGGGCGTC
GACGTCGTGA TCAACGCGGT CGGGATCCTC GCCGACCGGC GCGATACGAC GCTCGACACC
GTGCATCGTG CGGCGCCCTG CGCGCTCTTC ACGGCATGCA GCCGCGTCCG CGTGCGGCGT
GTGATCCAGA TCTCGGCGCT GGGCGTCGAA CGCGGCGACA CGCCGTATTT CGCCAGCAAG
TACGCAGCCG ACACCTTCCT GCAGACGCTG CCGCTCGATT ACCGGATCGT GCGGCCCGCG
CTCGTCTACG GCGCGGCCGG CACGTCGGCA CGGTTCTTCC GGATGCTCGC GAGCCTGCCC
GTGCACGCGT TGCCGGCGGG CGGCCACCAA CGGCTGCGCC CCGTGCACGT CGACGATCTC
GCCGAACTCG TCGCGCGGCT CGTCGTTTCG CCGGCGGCCG GCCATTCGGT CATCGACGCG
GTCGGCGCTG ATGAAGTCGA ATACCGCGAG ATGCTGAGCG GCTATCGCGC CGCACTGGGC
TTCCCGCCGG CAGCCCGCAT TGCGTTGCCG GGCCCGCTGG TCGGGGGCGC GGCCGCGCTG
GTCGGCACGC TGCCGGGCGC GATGCTGACC CGCGATACGT GGACGATGCT GCGCGGCGGC
AACACCGGCG ATCCCGCGGC GTTGGCGGCC GTGCTCGGCC GGCCGCCGCG CGGCCTGCGC
AGTTTCATCG GCGCGGACGC GCTCGCGCTG CGCCGCGACG CCCTCGCGAT GTGGCGGCGG
CCGCTGCTGC TCGGCGCGCT TGCGATCGTC TGGATCTGGA CGGCCATCGT GAGCGCGTTC
GTCCACCCGC AGAGCGACAG CCTTGCGATG CTCGCCCGCG CGCACCTCAC CGGGCTGCCC
GCGCTGATCG CGCTCTACGC CGCCTGCGCG CTGGACTTCG CGTTCGGGGT GGCGACCGTT
GCCGCGCCGT CGCGCCGTCT GTGGGTGGCG CAAGCCGCGC TGATCGTCGC GTACTCGGCC
GTCATCGCGG TCACGATGCC CAGCCTGCTG GCCGAACCGT TCGGCCCGGT GATCAAGAAC
GTGCCGATTC TCGCGATCCT GCTGATCCTG TTTTCAGAAG AAGAACAGCC ATGA
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| Protein sequence | MNILVCGANG FIGRALCARL EAGGHRVLRG VRHAVGPHDV AIDFATDVDP DAWLARLAGV
DVVINAVGIL ADRRDTTLDT VHRAAPCALF TACSRVRVRR VIQISALGVE RGDTPYFASK
YAADTFLQTL PLDYRIVRPA LVYGAAGTSA RFFRMLASLP VHALPAGGHQ RLRPVHVDDL
AELVARLVVS PAAGHSVIDA VGADEVEYRE MLSGYRAALG FPPAARIALP GPLVGGAAAL
VGTLPGAMLT RDTWTMLRGG NTGDPAALAA VLGRPPRGLR SFIGADALAL RRDALAMWRR
PLLLGALAIV WIWTAIVSAF VHPQSDSLAM LARAHLTGLP ALIALYAACA LDFAFGVATV
AAPSRRLWVA QAALIVAYSA VIAVTMPSLL AEPFGPVIKN VPILAILLIL FSEEEQP
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