Gene BamMC406_5104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5104 
Symbol 
ID6179636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2273635 
End bp2275656 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content64% 
IMG OID641684856 
Producthypothetical protein 
Protein accessionYP_001811766 
Protein GI172064115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.711525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGC TGGTGGCCGT CGACAGACCC GTCGACGTGG AGGTCGACAG CGACGTTACC 
GTGCTGTCGG TCGAGCTCAG GCCGGTGGAC AGCGAACCGA TCGAGCTGGT TGCGGACGAC
AGGCCGGTCG AGGTCGAGGT GGACAGCGAG CTGATCGAGC TGGTGGCCGA CGAGAGGCCC
GTCGACGTCG AGGTCGACAG CGACGCGACC GAGCTGTTCG TGGAGCTCAG GCCCGTCGAC
AGGGAGTTGA TCCCGGTGGA GGTCGACGTG GACAGCGAGC CGATCGAGCT GGTGGCCGAC
GACAGGCCCG TCGACGTGGA AGTCGAGAGC GAAGCGACCG AGCTGTTGGT CGAGCTGAGG
CCCGTGGACA ACGAGTTGAT GCCGGTAGAA GTCGACGTGG ACAGCGAACC GATCGAGCTC
GTCGCCGACG ACAGGCCCGT CGACGTGGAA GTCGAGAGCG AAGCGACCGA GCTGTTGGTC
GAGCTGAGGC CCGTGGACAA CGAGTTGATG CCGGTAGAAG TCGACGTGGA CAGCGAAGCG
ACCGAGCTCG TCGCCGACGA GAGGCCGGTC GACGTGGAGG TCGACAGCGA AGCCACGGAG
CTGTCGGTCG CACTGAGGCC CGTCGACAGC GAGTTGATGC CCGTCGAGGT CGACGTGGAC
AGCGAGCCGA TCGAGCTGGT GGCCGACGAC AGCCCGGTCG ACGTGGAAGT CGACAGCGAA
GCGACGGAGC TGTCGGTCGA GCTAAGACCC GTGGACAGCG AGTTGATACC CGTCGAGGTC
GAGGTTGACA GCGAGCTGAT CGAGCTGGTG GCCGACGACA GGCCGGTCGA CGAGGAAGTC
GACAGCGAAG CGACGGAGCT GTCGGTCGCA CTGAGGCCCG TGGACAGCGA GTTGATGCCC
GTCGAGGTCG ACGTAGACAG CGAACCGATC GAGCTGGTGG CCGACGACAG CGCGGTCGAC
GTGGAAGTCG ACAGCGAAGC GACGGAGCTG TCGGTCGAGC TCAGGCCAGT CGACAACGAG
TTGATGCCGG TAGAAGTCGA CGTTGACAGC GAACCGATCG AGCTGGTTGC CGACGACATG
CCCGTCGACG TGGAGGTCGA CAGCGAAGCA ACCGAGCTGT CGGTTGAGCT GAGGCCCGTG
GACAGCGAGT TGATACCCGT CGAGGTCGAC GTTGACAGCG AACCGATCGA GCTGGTGGCC
GACGACAGAC CCGTCGATGT GGAAGTAGAC AGTGACGTAA CCGAGCTGTT GGTCGAGCTC
AGACCCGTGG ACAGCGAACC GATCGAGCTC GTCGCCGACG AGAGGCCGGT CGACGTGGAG
GTCGACAACG AAGCGACGGA GCTGTCGGTC GAGCTGAGGC CGGTGGACAG CGAGCTGATA
CCGGTCGAAG TCGACGTGGA CAGCGAACCG ATTGAGCTGG TCGCCGACGA CAGACCCGTC
GACGTGGAAG TCGAAAGCGA AGCCACCGAG CTATCGGTCG AGCTGAGGCC CGTGGACAGC
GAGTTGATAC CCGTCGAGGT CGACGTAGAC AGCGAACCAA TCGAGCTCGT CGCCGACGAG
AGGCCGGTCG ACGTGGAGGT CGACAACGAA GTGACCGAGC TATCCGTGGA GCTCAGACCC
GTCGACAACG AGTTGATGCC CGTCGAGGTC GAGGTGGAGA GCGACGTGAT CGAGCTATTC
GCCGACGAGA GGCCGGTGGA CGTCGAGGTC GACAACGAAG TGACCGAGCT ATCCGTGGAG
CTCAGACCCG TGGACAACGA GTTGATACCC GTCGAAGTCG AAGTGGACAG CGACGTGATC
GAGCTATTTG CCGACGAGAG ACCGGTCGAC GTGGACGACG AGAGCGACGT AACCGAGCTG
TTAGTCGAGC TGAGGCCTGT CGACAACGAA GTGATGCCGG TCGACAGCGA CGAGATTGCG
TTGCTGGACG ACGACACTGT CGTCGACAGC GAATTCACCG CCGAATTGGT CGCGAAGAGC
TGGGAGCCGT TGATCGCGTC GGTGCTGGTC GCCGTGATTT GA
 
Protein sequence
MIELVAVDRP VDVEVDSDVT VLSVELRPVD SEPIELVADD RPVEVEVDSE LIELVADERP 
VDVEVDSDAT ELFVELRPVD RELIPVEVDV DSEPIELVAD DRPVDVEVES EATELLVELR
PVDNELMPVE VDVDSEPIEL VADDRPVDVE VESEATELLV ELRPVDNELM PVEVDVDSEA
TELVADERPV DVEVDSEATE LSVALRPVDS ELMPVEVDVD SEPIELVADD SPVDVEVDSE
ATELSVELRP VDSELIPVEV EVDSELIELV ADDRPVDEEV DSEATELSVA LRPVDSELMP
VEVDVDSEPI ELVADDSAVD VEVDSEATEL SVELRPVDNE LMPVEVDVDS EPIELVADDM
PVDVEVDSEA TELSVELRPV DSELIPVEVD VDSEPIELVA DDRPVDVEVD SDVTELLVEL
RPVDSEPIEL VADERPVDVE VDNEATELSV ELRPVDSELI PVEVDVDSEP IELVADDRPV
DVEVESEATE LSVELRPVDS ELIPVEVDVD SEPIELVADE RPVDVEVDNE VTELSVELRP
VDNELMPVEV EVESDVIELF ADERPVDVEV DNEVTELSVE LRPVDNELIP VEVEVDSDVI
ELFADERPVD VDDESDVTEL LVELRPVDNE VMPVDSDEIA LLDDDTVVDS EFTAELVAKS
WEPLIASVLV AVI