Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5022 |
Symbol | |
ID | 6179623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2183385 |
End bp | 2184659 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684774 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001811684 |
Protein GI | 172064033 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.903187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA CCCAGCCTTT CTTCTCGCAG CCCCTTGCCG AGCGCGATGC GCCGGTGCGC AGCGCCATCC TGAAGGAGCT CGAGCGCCAG CAGTCGCAGG TCGAGCTCAT CGCGTCGGAA AACATCGTGT CGCGCGCGGT GCTGGAGGCG CAAGGTTCGG TGCTGACCAA CAAGTATGCG GAAGGCTATC CGGGCAAGCG TTACTACGGC GGCTGCGAAT TCGCGGACGA AGTCGAGGCG CTGGCGATCG AGCGCGTGAA GCAGATCTTC AACGCCGGCT ACGCGAACGT GCAGCCGCAC TCGGGCGCGC AGGCGAACGG CTCGGTGATG CTCGCGCTGG CGAAGCCGGG CGACACGGTG CTCGGCATGT CGCTGGACGC AGGCGGCCAC CTGACGCACG GCGCGAAGCC GGCGCTGTCG GGCAAGTGGT TCAACGCGGT GCAGTACGGC GTGAATCGCG ACACGATGCG GATCGACTAC GACCAGGTCG AAGAACTCGC GCACCAGCAC AAGCCGAACC TGATCATCGC CGGCTTCTCG GCGTATCCGC GCGCACTGGA CTTCGCTCGC TTTCGCGCGA TCGCCGACAG CGTCGGCGCG AAGCTGATGG TCGACATGGC GCACATCGCG GGCGTGATCG CCGCCGGCCG CCATGCGAAC CCGGTCGAGC ACGCGCACGT CGTCACGTCG ACCACGCACA AGACGCTGCG CGGCCCGCGC GGCGGCTTCG TGCTGACCAA CGACGAAGAG ATTGCAAAGA AGATCAACTC GGCGGTGTTC CCCGGCCTGC AGGGCGGCCC GCTGATGCAC GTGATCGCCG GCAAGGCCGT CGCGTTCGGC GAAGTGCTGC ACGCGGACTT CAAGACCTAC ATCGACAACG TGCTCGCGAA CGCGCAGGCG CTCGGCGAAG TGCTGAAGGC GGGCGGCGTG GATCTCGTCA CCGGCGGCAC CGACAACCAC CTGCTGCTGG TCGACCTGCG CCCGAAGGGC CTGAAGGGCG CGCCGGTCGA GCAGGCGCTG GAGCGCGCGG GCATCACCTG CAACAAGAAC GGCATTCCGT TCGACACCGA GAAGCCGACC GTCACGTCGG GCATCCGCCT CGGCACGCCG GCCGGCACGA CGCGCGGCTT CGGCGTCGCG GAGTTCCGCG AGATCGGCCG CCTGATTCTC GAAGTGTTCG ACGCGTTGCG CGCGAACCCG GAAGGCGACC CCGCGACCGA ACAGCGCGTG CGCCGCGAGA TTTTCGCGCT TTGCGAGCGC TTCCCGATTT ACTGA
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Protein sequence | MSNTQPFFSQ PLAERDAPVR SAILKELERQ QSQVELIASE NIVSRAVLEA QGSVLTNKYA EGYPGKRYYG GCEFADEVEA LAIERVKQIF NAGYANVQPH SGAQANGSVM LALAKPGDTV LGMSLDAGGH LTHGAKPALS GKWFNAVQYG VNRDTMRIDY DQVEELAHQH KPNLIIAGFS AYPRALDFAR FRAIADSVGA KLMVDMAHIA GVIAAGRHAN PVEHAHVVTS TTHKTLRGPR GGFVLTNDEE IAKKINSAVF PGLQGGPLMH VIAGKAVAFG EVLHADFKTY IDNVLANAQA LGEVLKAGGV DLVTGGTDNH LLLVDLRPKG LKGAPVEQAL ERAGITCNKN GIPFDTEKPT VTSGIRLGTP AGTTRGFGVA EFREIGRLIL EVFDALRANP EGDPATEQRV RREIFALCER FPIY
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