| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4785 |
|---|
| Symbol | |
|---|
| ID | 6180468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1920543 |
|---|
| End bp | 1921667 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684544 |
|---|
| Product | poly (3-hydroxybutyrate) depolymerase |
|---|
| Protein accession | YP_001811455 |
|---|
| Protein GI | 172063804 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.316027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA CCCGCTCGCC CGGCCGCACG ATGCCGCCCC GCTTCGCCGT TTCGCTCGCC
ATGCGCCGCA CGCTGCGCAC CGTCAGCGTC GCGTTCGCCG CCGCAGCCGC AGTGGCTTCC
GGCGCACCGT ACGCCGTCGC CGCTTCCGCC GATCCGTTGC CCGCCTATGC GGCCGACCTG
CAGCGCACGT CTGTGTCGGG GCTGTCGTCC GGCGGCTTCA TGGCCGCGCA GTTCGACGTC
GCGTTCTCGA GCCGGCTGAT CGGCGCGGGC ATCGTCGCGG GTGGGCCGTT CTATTGCGCG
GGCGTGAACC CGCTGATCCC GCCGGCGGTG GCCGCAACCA CGCTGTGCAT GCAGCCGATC
GGCCCCGCGC CGTCCGCGGC CGATGCGTGG CGCGCCGCAC GCACGTTCGC GCAGCGTGGC
GAGATCGACG ATCCGGCCGC GCTGCGCGGC CAGCGCATCT ACGTGTTCAG CGGCGCGAAG
GATACGGTGG TGTCGACGCG TGTCGTCGAC CAGACCGCGC GCTTCTACAC GCTCGCGCAG
GTGCCGGCCG CGAACCTCCA GTACCGCGCA TCGCCGGACG CCGGACACGC GTTCATCACG
AACCGCCCCG AGGACAACGC GTGCAGCGCG AACGCGAGCC CGTATATCGA CAACTGCGGC
TTCGAACAGG CGCACGACAT CGTGCGCTGG ATCTACGGCA CGCCCGACAA GCCGCTCAAT
CCGCCGGCCG CGCAGGCAGG CGGCAAGCTG CTGGCGTTCG ACCAGCGCGC GTTCGATCCG
CGGCGCGCGG CGTCGCTCGG CGATACCGGC TATGCGTACG TGCCGGCCGA TTGCGAGCGC
GTGACCTGCG CTGTGCACGT GGTGTTCCAC GGCTGCGTGC AGAACGTCGC GACGGTCGGC
GAGAGGATGA TTCGCGGCGT CGGCTACAAC GAGATCGCCG ATACGAACCG GCTGATCGTG
CTCTATCCGC AAGTCGAGAA ATCGGCCGTC AATCCGCTCG GTTGCTGGGA TTTCTGGGGC
TATACGAGCG CCGATCCGCT CAACCCGGGC TTCTACCGCC GCGACGCGCC GCAGATGGCC
GCCGTGATGC GGATGGTGCA GCGCCTCGGC GCCGCGCGTC AGTAA
|
|---|
| Protein sequence | MNITRSPGRT MPPRFAVSLA MRRTLRTVSV AFAAAAAVAS GAPYAVAASA DPLPAYAADL
QRTSVSGLSS GGFMAAQFDV AFSSRLIGAG IVAGGPFYCA GVNPLIPPAV AATTLCMQPI
GPAPSAADAW RAARTFAQRG EIDDPAALRG QRIYVFSGAK DTVVSTRVVD QTARFYTLAQ
VPAANLQYRA SPDAGHAFIT NRPEDNACSA NASPYIDNCG FEQAHDIVRW IYGTPDKPLN
PPAAQAGGKL LAFDQRAFDP RRAASLGDTG YAYVPADCER VTCAVHVVFH GCVQNVATVG
ERMIRGVGYN EIADTNRLIV LYPQVEKSAV NPLGCWDFWG YTSADPLNPG FYRRDAPQMA
AVMRMVQRLG AARQ
|
|---|
| |