Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4694 |
Symbol | |
ID | 6179133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1814454 |
End bp | 1815773 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684453 |
Product | major facilitator transporter |
Protein accession | YP_001811364 |
Protein GI | 172063713 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACA CCATGAGCAC TCTCGCCCAG CCCGCCGCCC ACGCGCCCCG CCGTGTCCGC AACAGCCGAC TCGCGTCCGC GAGCATGATC GGCACGTCGC TCGAGTGGTA CGACTTCACG ATCTACAACA CGCTCGCCGC GCTCGTCTTC AACCATCTGT TCTTTCCGTC GGTCGATCCG CTGGCCGGCA CGATCCTCGC GTTCTCGACC TATGCGGTCG GCTACGTGTC GCGCCCGCTC GGCGGATTCG TGTTCGGCAA CCTCGGCGAC CGCATCGGCC GCCGCGCGGT GCTGATGCTC ACGCTCGTGC TGATGGGGGT CACGACCGCG CTGATGGGCG CGCTGCCGAC CTATGCGCAG GCGGGCATCC TGAGCCCGAT CCTGCTCGTC GCGCTGCGCT TCGTGCAGGG CGTCGCGCTC GGCGGCGAAT GGGCCGGCGC GGTGCTGCTG TCGGTCGAGC ATGGCGACCA GAAGCGACGT GGGCTGTCCG CGTCTTGGAC GCAGATGGGC CCGTCGTTCG GCACGCTGCT CGGCACCGGC TGCATCGCGC TCGTGACGCT GTCCACCACG TCCGACACCT TCCTGTCGTG GGGGTGGCGC GTGCCGTTCG CGGCCAGCGC GCTGCTCGTC GTGTTCGGTT TCTGGCTGCG CCGCGGCGTC GACGAAACGC CGCAATTCGA GCAGCTCGCC GAGTCGCACG CGACCGCCGA AGTGCCCGTC GCCGAAGTGC TGAAATGCCA TTGGCGGCGC CTGCTGATCG CCGGCGGCTC GCGCATCGGC TCCGACGTGC TGTATGCGTT GATCGTCGTG TTCACGCTGA CCTACGTGAC GACCGTGCTG CACCTGTCGC GCCCCGTCGC GCTGACGGCG GTGATGGTCG GCACGGCGTG CAACGCGCTC GCGGTGCCGT TCTTCGGCGC GCTGTCGGAC CGCTTCGGGC GCCGTCCGGT GTACCTCGCC GGCGCGATCG CCGGCATCGT GTGGGCGTTC GTGTTCTTCA CGATGCTCGA CACCGCGCGG CCGGGCGCGA TCGTCGCGGC CGTCGCGATC GGCCTCGTGA TCCACGCGGT GATGTACGGC CCGCAAGGCG CGTTCGTCAC CGAGCAGTTC CCGACGCGCG TCCGTTATGC GGGCTCGTCA CTGGCGTACA CGCTCGCCGG CATCGTCGGC GGCGGCTTCG CGCCGCTCGT GATCGCGACG CTGTTCCGCC AGACGGGCAC GACCACGGCC GTGTCGCTGT ACGTGACCGC GGCGCTCGTC GTGACCTCGA TCGCGCTGCT CGCCGCGCGC GAGACCGCCC ACCGTCCGCT CGCGGACTGA
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Protein sequence | MPDTMSTLAQ PAAHAPRRVR NSRLASASMI GTSLEWYDFT IYNTLAALVF NHLFFPSVDP LAGTILAFST YAVGYVSRPL GGFVFGNLGD RIGRRAVLML TLVLMGVTTA LMGALPTYAQ AGILSPILLV ALRFVQGVAL GGEWAGAVLL SVEHGDQKRR GLSASWTQMG PSFGTLLGTG CIALVTLSTT SDTFLSWGWR VPFAASALLV VFGFWLRRGV DETPQFEQLA ESHATAEVPV AEVLKCHWRR LLIAGGSRIG SDVLYALIVV FTLTYVTTVL HLSRPVALTA VMVGTACNAL AVPFFGALSD RFGRRPVYLA GAIAGIVWAF VFFTMLDTAR PGAIVAAVAI GLVIHAVMYG PQGAFVTEQF PTRVRYAGSS LAYTLAGIVG GGFAPLVIAT LFRQTGTTTA VSLYVTAALV VTSIALLAAR ETAHRPLAD
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