Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4692 |
Symbol | |
ID | 6179131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1812546 |
End bp | 1813589 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641684451 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811362 |
Protein GI | 172063711 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC GGTTTCTTGA AACCTTCGTC TGGCTCGCGA AGCTGGAGAA CTTCCGGCTC ACGGCCGAGA AACTGCACAC GACGCAGGCG GCCGTGTCGA GCCGCATCGC GTCGCTCGAA GAGGCGTTCG ACGTGCGGCT GTTCGACCGC AACACGCGCT CGGCCACGCT CACGCCCGCG GGCCGGCGCA TGCTCGCGTA CGCGGAGCGG ATCGTGCGGC TCGACGGCGA GATGCGGCGC GACATCGACG CGGCGAGCGA CGCGGGCCTG ATCCGGATCG GCGTGATCGA GTCGATCGTG CACAGCTGGT TTCCGGCGCT GATGGCGCAA TTGCGCGAGC GCTATCCGCG CCTCGACGTC GAGATCACGA GCGACACGAC GCTGCACCTG ATCCGCCTGC TCAGCACCGA CGGCGTCGAC CTGATCCTGC AGACCGACCC GGTGCCCGGC CCCGACTTCA CGAACCTGCC GCTGTGCGAA TTCCCGGTGC GCTGGGCGGC GAGCCCGCGT CTCGGGCTCG GCGGCGAACG GCTCGACGTC GCGCTGCTTG CCGCGTATCC GATCATCAGC TTCTCGCGCC ACTCGGGGCC GCACGCGACG ATCGAGCGGC TGTTCGCCGC CGTCGAGCGG CCGGCCAGCA TCAACTGCAT CACGTCGGTC GCCGCGATGA TCCGGCTCGT CGCCGACGGT TTCGGCGTGG CCGCGCTGCC GCCCGCGATC ATCGGGCGCG AACTGCAGGA AGGCGCGCTC GAACTGCTCG ACGTGGAACC CGAATTCCCC GCGCTGCCGC TCGTCGCGTC GTATCGCACG CAGGGCCAGC CGGTCGCCGC GCGCATCGCG GAACTGGCGA GCGAAGTCGC GCGCGCGATG CCGGCCGCCG CGAGTCAGCC GAAGGCGGTC GCGTCGGCAA AGGCCGCAGC CGATTCCATC GCCAAGGCCG CTGCCCGGCC GGCGACAACG ACCGGAACCG CGGCGGCAAA ACGCACGCCG AAATCCGCGC AGCCCGCCGC CGCCGCGGCG AAACGCCGTC CGCGCCGCTC ATAA
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Protein sequence | MNIRFLETFV WLAKLENFRL TAEKLHTTQA AVSSRIASLE EAFDVRLFDR NTRSATLTPA GRRMLAYAER IVRLDGEMRR DIDAASDAGL IRIGVIESIV HSWFPALMAQ LRERYPRLDV EITSDTTLHL IRLLSTDGVD LILQTDPVPG PDFTNLPLCE FPVRWAASPR LGLGGERLDV ALLAAYPIIS FSRHSGPHAT IERLFAAVER PASINCITSV AAMIRLVADG FGVAALPPAI IGRELQEGAL ELLDVEPEFP ALPLVASYRT QGQPVAARIA ELASEVARAM PAAASQPKAV ASAKAAADSI AKAAARPATT TGTAAAKRTP KSAQPAAAAA KRRPRRS
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