| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4510 |
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| Symbol | |
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| ID | 6180565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1612026 |
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| End bp | 1613693 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684271 |
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| Product | NERD domain-containing protein |
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| Protein accession | YP_001811182 |
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| Protein GI | 172063531 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCC TCATTCCCGA CGACTGGAAA AGCCTCGCCG CCACCGGCGC GGCCGAACGC
GAGCGCGAGA CGCTTGCCGC CCTCGAACAT GCGCTGCCGG ACACCTACAC CGTCTATCAC
GGCGTGCACT GGACGCGTGC CGATCAAGGC TTTTCGGTGT TCGGCGAAGC GGCGTTCGTC
GTCGTGAGCC CGGCCGGGCG CGTGCTGCTG ATCGAACAGA AGGCCGGCTT CCTGCGCGAA
ACACCGAAGG GGCTCGTGAA GGTCTACCTG CAGAAGGAGC GCAACGTCCC GATCCAGCTC
GCGCGCACGC AGGAGACGCT GCACCGGCGG CTGACCGCCG CGCTCGGTGC GGGCGTCTAC
GGCGTCGAGG CGCTGCTGTA CTGCCCCGAC TACTCGATCC GGGAGACGGC GATTGCGGGC
GTCGCGGCCG ATCGCATCGT CGACGCGTCG CGCAAGTCGC AGCTCGCGCA GGTGATCCTG
CAGATCCTGC CCGAGCACGA CGAAGCGTTG CCGAACGCGG CGAAGCTGCA TCATTTCCTC
GCGGACGAGC TGGCGCTCAC GCCTGACACG AGTGCGCTCG TCGGGCAGGC CGGCACGCTC
GTCACGCGGC TGTCGGGCGG GCTCGCCGAA TGGGCGCGGC AGCTCGAGTT CACGCCGTTC
CGCTTGCGCG TGACGGGCAC CGCGGGTTCG GGCAAGACGC AGCTCGCGGT GCAGGCGATG
CGCGACGCGG TCGCGGCCGG CAAGCGCGTG CTCTACGTCT GTTTCAACCG GCCGCTCGCC
GACTACATCG CACGCGTCGC GCCGCCCGGC GCGAAGATCG CGAACTACCA TCAGCTGTGC
GACTGGGTGG CGCGCGACGG CGGCTATACG CCCGACTTCG ACGTGCCGGG TGCATTCGAA
CGGCTCGAGG CGCGCTTTGC GGAAGCGCCG ATTCCGGAAC GCTGGCGCTT CGACGTGCTG
ATCGTCGACG AAGGACAGGA TTTCCACGCG CCGTGGGCAA CGGCGCTCGA GCGCCTGCTC
GCGCCGGACG GGGCCTGGTG GTGGCTGGAG GACCCGCTGC AGAACCTTTA TTTGCGCGAG
CCCGTCGCGC TACCCGGCTG GGTCACGCTG AAGGCGCTGA CCAACTACCG CAGCCCGCGC
GACCTGCTCG AATTCGTGCG CGACATCGTC GGCCGCGTCG AGCCGCTCGC GGCGGAACTG
CGCTCGGGCA GCCCGTTCGA CGGTTCCGAT CCGTCGGTGT CGTCATACGG TGAAGACGGC
GCATCGGGCG ACTCGCTCGC CGAAGCCTGC ATCGACGCAA CCAAGCGCGC GATCACCCAC
GCGCTGTCGC TCGGTTTTCG CAAGCAGGAC ATCGCGGTGT TGTCCTATCG CGGCCGCGAA
AGCTCGGTGC TCGCGTCGCT CGACCAGCTC GGCCCGCACC GCATCAAGCG CTTCACCGGC
AAGTACGATC TGTTCGGCAA CCCTGAATAT CGCGAAGGCG ACGTGTTGCT CGATTCGATC
TACCGCTTCA AGGGGCAATC CGCACCGTGC GTGATCCTCA CCGAGATCGA CTTCGACACG
CTGGATGCGC GCGCGGCCCG CAAGCTGTTC GTCGGCGCGA CGCGCGCGAC GATGAAGCTG
CTGCTCGTCG CGTCGGTGCG CTCGGCCGCG CAGCTCACGA GCGGTTGA
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| Protein sequence | MARLIPDDWK SLAATGAAER ERETLAALEH ALPDTYTVYH GVHWTRADQG FSVFGEAAFV
VVSPAGRVLL IEQKAGFLRE TPKGLVKVYL QKERNVPIQL ARTQETLHRR LTAALGAGVY
GVEALLYCPD YSIRETAIAG VAADRIVDAS RKSQLAQVIL QILPEHDEAL PNAAKLHHFL
ADELALTPDT SALVGQAGTL VTRLSGGLAE WARQLEFTPF RLRVTGTAGS GKTQLAVQAM
RDAVAAGKRV LYVCFNRPLA DYIARVAPPG AKIANYHQLC DWVARDGGYT PDFDVPGAFE
RLEARFAEAP IPERWRFDVL IVDEGQDFHA PWATALERLL APDGAWWWLE DPLQNLYLRE
PVALPGWVTL KALTNYRSPR DLLEFVRDIV GRVEPLAAEL RSGSPFDGSD PSVSSYGEDG
ASGDSLAEAC IDATKRAITH ALSLGFRKQD IAVLSYRGRE SSVLASLDQL GPHRIKRFTG
KYDLFGNPEY REGDVLLDSI YRFKGQSAPC VILTEIDFDT LDARAARKLF VGATRATMKL
LLVASVRSAA QLTSG
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