Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4477 |
Symbol | |
ID | 6179674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1579706 |
End bp | 1580590 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684238 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001811149 |
Protein GI | 172063498 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.600704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.42821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGCG CCTTCGCCCG TACCGTCGAA TCCCGCTTTG CCGAGCTGAC GCCGACGGCG AAGCGCATCG CGAGCTACAT GCTCGCGAAC CTCGACCGGC TGGGGCTCGA GACGGCCGAC CAGATCGCGC AGCAGGCCGG CACCAGCGGG ATTTCGGTCG GGCGCTTCCT GCGCAGCGTC GGCTACCGCA ACCTCGACGA CCTGAAACGC GAGTTGCGCG GCGGCGCCGA CCGGCCGTGG ATGATCACCG ACCGCCTCGA CGAATACCGC CGCACCAACG GCACCCCCGG CCCCCAGGCG GCCGCCACCA ACAGCAGCGA CCGCGCGCTC GCGTCGTCGC TCGATCGCGA ACTCGACGCG ATCCGCCACG TGTACCGGCT CGCCGAGGAA CCGGTGTTCG CGCAGGTCGC GGACCGGATC GCGCATGCCG ACGCGGTATT CATCCTCGGC ATCCAGTCGA CCCGCGGCAT CAGCAATGCG TTCAGCAGCT ATCTCGAGTA CCTGCGCCCG CGCGTGTTCT ATTCGGACGG TCAGTCGGGC TCGTACGTCG ACTCGCTGAA TTCCGAGTTC GAGCGGCCGT ATTGCATCGT CACCGACGTG CGCGCCTATT CGCGCAGCGC GCGCCGCTAT TGCCAGGCGG CCGCCGAGCG CGGCCAGCCG TTCGCGCTGG TCACCGATCT CTATTGCCCG TGGGCACGCG AATGGCCGGC CGACCTGCTG CAGGTAAAGA CCGACGTCGG CCAGTTCTGG GATTCGCTCG CGCCGCTCAC CTGCCTGTTC AACCTGCTGA TCACCGCCGT GGTCGATCGC CTCGGTCCCG CGATCGACCG ACGCGTCGCG CGCAACCGCG AACTGCAGCA CACGTTCGAC CAATTCGAAT CCTGA
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Protein sequence | MTCAFARTVE SRFAELTPTA KRIASYMLAN LDRLGLETAD QIAQQAGTSG ISVGRFLRSV GYRNLDDLKR ELRGGADRPW MITDRLDEYR RTNGTPGPQA AATNSSDRAL ASSLDRELDA IRHVYRLAEE PVFAQVADRI AHADAVFILG IQSTRGISNA FSSYLEYLRP RVFYSDGQSG SYVDSLNSEF ERPYCIVTDV RAYSRSARRY CQAAAERGQP FALVTDLYCP WAREWPADLL QVKTDVGQFW DSLAPLTCLF NLLITAVVDR LGPAIDRRVA RNRELQHTFD QFES
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