Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4435 |
Symbol | |
ID | 6180764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1521672 |
End bp | 1522214 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684196 |
Product | isochorismatase hydrolase |
Protein accession | YP_001811107 |
Protein GI | 172063456 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAG TCCCTTCCCC CAAACGTGCG CTGCTCGTCA TCGATATGCA GGTAGGGCTG TTCCATGGCA CCGATCGTCC GCATGACGGT GAACGCGTGC TGGCCAACAT CAACCGGCTG ATTCGTCGCG CGCACGAAGC CGGTGCGCCC GTGTTCGCCG TGCGCCACAC CGGCCCGGCC GGCTCGCCGA TCGCGCCCGG TGCGCCGCTG GCCGCGTTAC TGCCGGAGCT CGCGATCGAT ACGGCACGCG ACATCGTGTT CGACAAGACC CGGCCGAGTT GCTTCGCGGG CACGCGGCTC GCCGAGTGGC TGCACGCGGC TGGTATCGGG GAGATCGTGA TTGCCGGGAT GAAGACGCAG TACTGCGTCG ATACCGCGTG CCGCGCGGCC GCCGATCTCG GGTTTCGCGC GGTGCTCGTC GCCGATGCGC ACACCTGCAT GGACACGCCC GCGCTGCCGG CCGAGCGGAT CATCGCGCAT CACAATGCGA CGCTTGGCGG GCCGTTCGCG GTGCTGACGA CGACTGAGGC GTGCGTATTC TGA
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Protein sequence | MSAVPSPKRA LLVIDMQVGL FHGTDRPHDG ERVLANINRL IRRAHEAGAP VFAVRHTGPA GSPIAPGAPL AALLPELAID TARDIVFDKT RPSCFAGTRL AEWLHAAGIG EIVIAGMKTQ YCVDTACRAA ADLGFRAVLV ADAHTCMDTP ALPAERIIAH HNATLGGPFA VLTTTEACVF
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