Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4411 |
Symbol | |
ID | 6181087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1493543 |
End bp | 1494418 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684172 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811083 |
Protein GI | 172063432 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0509478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.98744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACTTC GCCATCTCCG ATACTTTCTG GCCGTGGCCG CCACGTCGAA CTTCACGAAG GCCGCTGAAA CGCTCGGCAT GGGGCAGCCG CCGCTGAGCC AGCAGATCAA GGCGCTCGAG AGCGAACTCG GCGTGGAACT GTTCAAGCGG ACCGCACGCG GCGCCGAACT GACCGTCGCC GGCGAGGTGT TCGCGGAAGA GGCGCGGCGC GTGCTCGACG ACGCCGAGCG CGCGGCGCGG GCGGCAAAGC GGGCCGCGCG CGGGGAAATC GGGCAGCTTC GAGTGGGTTT CACCGGCACG GCCGCTTTCA ATTCGAAAGT GGCCGACCTG ATTCGCCGCT TTCGCGAAGC GTTTCCGGAC GCGGAGCTGA CGTTGCAGGA GGCGACCTCC GGCGTGCTGC TCGAGGCGCT GGAGGCCGGG CGGCTCGATG TCGCGATCGT GCGCCCCGAG CGGCGTATCG CCGACACGTT GGTGGCGGCG GACTGGGACG AGGAGCCGAT GTTCGTCGCG TTGCCGGTCG GGCATCGGCT CGCGCAGCGG CGTCGGATCG ATCTGGCGGA GTTGGCCGAC GAGGCGTTCG TGCAGGTGCC GCGCGAAGCC GGCAGCGCGC TGTTCGACGA CATCGTCGCC GCGTGCAATG CCGCCGGGTT TCAACCGCGC ATGGCGCAGC CCGCGCCGCA GATCACGTCG GCGGTGACGC TCGTCGCGGC CGGGCTCGGC GTGTCGATCG TGCCGAAGGC GATCACGCAG GTGCAGGTCG CGGGCGTCGT GTATCGGCCG GTCGCCGGCG ATGGTTTGCG CGCGAGGCTC GCGATCGCGT CGCGACGCGA TGATCCGTCC GCGGTGGTGC GCAATTTTCT GGCGCTTGCG TGGTAG
|
Protein sequence | MELRHLRYFL AVAATSNFTK AAETLGMGQP PLSQQIKALE SELGVELFKR TARGAELTVA GEVFAEEARR VLDDAERAAR AAKRAARGEI GQLRVGFTGT AAFNSKVADL IRRFREAFPD AELTLQEATS GVLLEALEAG RLDVAIVRPE RRIADTLVAA DWDEEPMFVA LPVGHRLAQR RRIDLAELAD EAFVQVPREA GSALFDDIVA ACNAAGFQPR MAQPAPQITS AVTLVAAGLG VSIVPKAITQ VQVAGVVYRP VAGDGLRARL AIASRRDDPS AVVRNFLALA W
|
| |