| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4307 |
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| Symbol | |
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| ID | 6180182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1379558 |
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| End bp | 1380814 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684074 |
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| Product | porin |
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| Protein accession | YP_001810985 |
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| Protein GI | 172063334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0314487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.78321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCCT ACAAAATCGG CCGGCGCGCC CGCTTGCGCG CCGCCACGCC GCATGGCGTC
CGCCGCCACC ACCGCACCGT AGCACTCCCC GCGACCGCGA TTGCCGCCTG CATCGCCGGC
TTGATTCCGT GCGTCGCTCA CGCGCAGAGC AGCGTGACGC TGTACGGCCT GATCGACACG
TCGATCACCT ATGCCACCAA TCAGCGTACG CAAGGCGCCG GTTCGCCGGG CAGCGGCAGC
GTCGCGCTGA CGAGCGGCGC ATTGAACGCA TCGCGCTGGG GGCTGCGCGG CCGCGAGGAT
CTCGGTGGCG GGACGGCGGC GGTCTTCTCG CTCGAAAACG GCTTCTCCGG AACGACCGGC
AAGCTGTCGC AGAAAGGCGT CGACATGTTC GGCCGTCAGG CATGGATCGG CGTGAGCTCG
CGCACGGCCG GCACGCTCAC GTTCGGCCGC CAGTACGACC CTATCCTCGA TTTCGTGACG
CCGCTCGGCG CGTCGGGCCC CGGCTGGGGC GGCAACCTCG CGGTGCACCC GTACGACAAC
GACGACTCGA ACCGCAACCT GCGCATCAAT CACGCAGTGA AGTACACGAG CGCGACGTAT
CGCGGCCTGA CGTTCGGCGC GCTGTACGGG TTCTCGAACA CGGCCGGCGC GTTCTCGAAC
AACGCCGTAT GGAGCGCGGG GCTCGGCTAT GCGAACGGAC CGCTGAAGCT CGGCGCCGGT
TACCTGAAGA TCAGCCGCGA CCGCAACGCG CCGAACCCGG ACGGCGCGCT GAGCACGGTC
GACGGCTCGG CGACGATCAC CGGCGGCAAC CAGCAGATCT GGGCCATGGC CGGCCGCTAT
GCGTTCGGCC TGCATTCGGT CGGCGCCGCG TGGTCGCACT CGGCCACGGA CGGCGTGAGC
GGCGTGCTCC AGGGCGGTGG CATCACGCCG CTGAAGGGCG AATCGCTGGT CTTCGACAAT
TTCACGGTCG ACGGCCGCCT CTTCGTCACG CCGGCGGTCA GCCTGTCCGC AGCGTACACG
TACACGATGG GCCGATTCGA CACGCGCACC TGCCAGACGC GCCCGAAATG GAACCACGTG
GTCACGCAGG CCGGCTATGC GTTCTCGCCC CGCACGGACG CGTATCTCGA AGCCGTCTAT
CAAAGCGTGA GCGGCGGCCA CGGCAACCCC GCGTTCAACG CGACGGTCTG GACGATGACG
CCGTCCGCCA GCAGCAACCA GCTGGTGGTC GCGCTCGGGT TGCGGCACAA GTTCTGA
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| Protein sequence | MYSYKIGRRA RLRAATPHGV RRHHRTVALP ATAIAACIAG LIPCVAHAQS SVTLYGLIDT
SITYATNQRT QGAGSPGSGS VALTSGALNA SRWGLRGRED LGGGTAAVFS LENGFSGTTG
KLSQKGVDMF GRQAWIGVSS RTAGTLTFGR QYDPILDFVT PLGASGPGWG GNLAVHPYDN
DDSNRNLRIN HAVKYTSATY RGLTFGALYG FSNTAGAFSN NAVWSAGLGY ANGPLKLGAG
YLKISRDRNA PNPDGALSTV DGSATITGGN QQIWAMAGRY AFGLHSVGAA WSHSATDGVS
GVLQGGGITP LKGESLVFDN FTVDGRLFVT PAVSLSAAYT YTMGRFDTRT CQTRPKWNHV
VTQAGYAFSP RTDAYLEAVY QSVSGGHGNP AFNATVWTMT PSASSNQLVV ALGLRHKF
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