| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4256 |
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| Symbol | |
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| ID | 6181131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1313584 |
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| End bp | 1315383 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684025 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_001810936 |
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| Protein GI | 172063285 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.844754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCGT CCATCCGGAC CCGCATTCTT GCCGCGTGCG TCGCCATCGT CGTCTTCGCG
CTCGTCGCCA CCACGCTGAT CAACTATTTC ATCGCACGCT CGTACAACGA GGACGCGATC
GACCGCAACC TGACCTCCGT CGCGAGCGGC CACGTGGTCG GCATCGGCGA CTGGGTCGCG
ACCAGGAGCC GGATGATCGC GTCGCTGCAG GACGCCGCGC TGTCGCCGGA TCCACTGCCG
GTGTTCAAGC AGATGGCCGC GGCCGGCGGC TTCACGAACG TGTACGCGGG CTACGCGGAC
AAGGTGTTCC ATTTCTCCGA TCCGACGGGC ATCCCGCCCG ACTACGATCC GACCGGCCGC
CCGTGGTACA AGCAGGCCGC TCAGGCCGGC AAGCCGGTCG TCACGCCGCC TTACGTCGAC
GCGGGCACCG GCAACCTGGT CGTCACGTTC GCGGTGCCGA TCCTGCGCGA CGGGGCGCTG
AAGGGTGTCG TGGCGGCCGA CGTCGCGATG GATAGCGTGA TCGCGAACGT GAAGTCGATC
CACCCGACGC CCGCGAGCTT CGGCATGCTG ATCGACAGCA ACGGCCACGT CGTCGCGCAT
CCCGACGCGA AGCTCACGCT GAAGGCGGTG GCGGACGTGT CGCCCGACCT CGGCGGCATG
AGCGCCGCGT CGCTGGCCGC GGCCACCGCG CCGGTCGAAG TGCACGTCGG CGACGACGCG
AAGCTCGCGC GCGCGCAGGC CGTGCCGGGC ACCGACTGGT ATGCGCTGGT GCTGCTCGAC
AAATCGGAAG CGACGGCCGG CATGCGCTCG CTGCTGACCG CGTCGCTGGT CACGCTGGTC
GTGATCGTCG GCGTCGCGTC GCTGATCATC GGCGCGATCA CCACGACCGC ATTCCGCCGC
CTGTCGCAGG TGCGTCAGGC GATGGCGTCG ATCGGCTCGG GCACGGGCGA CCTGACGCAG
CGCTTGCCGG CCGAAGGCCG CGACGAAGTG GCCGATATCG CGCGCTCGTT CAACAGCTTC
GTCGACAAGC TGAACGACGT GATGCGACAG ATCCGCGACG CGAGCGAATC GGTGCGCACG
GCCGCGAACG AAATCGCCGC GGGCAACCAG GACCTGTCGT CGCGCACCGA ATCGGCGGCG
GCGAGCCTCG AGGAAACGGC CGCGTCGATG GAAGAGATCA CCGCGACGGT CGGTCAGTCT
GCGGCGGCTG CCGGCCAGGC CGACGAACGC GCGGCCGCGG CGTCGCGGAT CGCGTCGCAC
GGCGGCGTGG TCGTGTCGGA CGTGGTGGCG ACGATGGGGA AGATCGAGGA GGCGTCGGGC
CGGATCGGCG ACATCATCGG CGTGATCGAC GGCATCGCGT TCCAGACCAA CATCCTCGCG
CTGAACGCGG CCGTCGAAGC GGCGCGCGCC GGCGAGCAGG GCCGCGGTTT CGCGGTCGTC
GCGCAGGAAG TGCGCAGCCT CGCGCAACGC AGCGCGCAAG CCGCGCGGGA GGTGAAGGTG
CTGGTCGAGT CGACGGTGGC GAGCGTGTCG GCCGGGTCGG GGCAGGTGCG CCAGGCCGGC
GACACGATGC GCGAGATCGT GTCGAACGTC GCCAACGTGA CGACGATCAT CTCCGAGATC
ACGCACGCAG CGAACGAGCA GACGCGCGGC ATCCAGGAAG TGAATCGCGC GGTCACGCAG
CTCGACGAGA TGGTGCAGCA GAACGCCGCC CTCGTCGAAC AGTCGACCGC GGCCGCGACC
GCACTTCAGA CGCAGGCGAA CGCACTCGCG ACGACGGTCG GGCAGTTCAA GGTCGCATGA
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| Protein sequence | MFSSIRTRIL AACVAIVVFA LVATTLINYF IARSYNEDAI DRNLTSVASG HVVGIGDWVA
TRSRMIASLQ DAALSPDPLP VFKQMAAAGG FTNVYAGYAD KVFHFSDPTG IPPDYDPTGR
PWYKQAAQAG KPVVTPPYVD AGTGNLVVTF AVPILRDGAL KGVVAADVAM DSVIANVKSI
HPTPASFGML IDSNGHVVAH PDAKLTLKAV ADVSPDLGGM SAASLAAATA PVEVHVGDDA
KLARAQAVPG TDWYALVLLD KSEATAGMRS LLTASLVTLV VIVGVASLII GAITTTAFRR
LSQVRQAMAS IGSGTGDLTQ RLPAEGRDEV ADIARSFNSF VDKLNDVMRQ IRDASESVRT
AANEIAAGNQ DLSSRTESAA ASLEETAASM EEITATVGQS AAAAGQADER AAAASRIASH
GGVVVSDVVA TMGKIEEASG RIGDIIGVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV
AQEVRSLAQR SAQAAREVKV LVESTVASVS AGSGQVRQAG DTMREIVSNV ANVTTIISEI
THAANEQTRG IQEVNRAVTQ LDEMVQQNAA LVEQSTAAAT ALQTQANALA TTVGQFKVA
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