Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4209 |
Symbol | |
ID | 6180023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1262673 |
End bp | 1263473 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683978 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001810889 |
Protein GI | 172063238 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.602642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.235438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGAC TCTTCTCCGA AATCGCGATG CACCAGGCGC TCGGCCGCGC GATCGATCAT CTCGGCCAGC CGCGCTTCTG GCGGTTCCTG GTGCTGCTGC TCAACGAAAT GGTGCCGTTC GACAACGCGC TCGCGACCGC GATCGGCCGC GACGGCGTGC CGCTCGTGCT CGACGAATAC GACACGGGCG GCACCGACAG CGCGTCGCCG GTGCCGCTTT ACCTCAACGG GTTATATCTG CTCGATCCGT TCCTGCAGGC CGCGCACGAC GGGCTCGCCG ACGGCTGCTA CCGGCTCGAG GAAGTCGCGC CCGACCTGTT CCGGCAGAGC GAGTATTTCC TGAGCTACTT CCGCGATGCG GTCGGCGACG ACGAAATCCA GATCCTGCTG CGGCCGAACC GCGACCTGCT GCTGTCGTTG TCGCTCGGCG CGGCCACGCG CTTCGACGTC GAGCCGCTCG GCAAGCTGAC GGCCGCGATG CCGTGGGTGC TCGCGGCGAT CCGGCAGCAC TGGCGGCTGG TGGGCGATGC CGCGCGCGCG ACCCCCGACG ACGATCTCGG CGCGCGCGTC GAGCAGGCGC TCGCGCGCTT CGGCGCGGGC GTGCTGACAG AGCGCGAGAT GTCGATCGCG CGAATGGTGC TGCGCGGCAA TTCGTCGAAG GCGATCGCGG AGCGGCTCGC GATTTCACCG GAGACGGTGA AGGTGCATCG GCGGCATCTC TACGCGAAGC TCGGGATCTC GTCCCAGCCG GAGCTGTTCT CGCGGTTCAT TCACGCGCTG GGAGAGCATG CGTCGGGGTA A
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Protein sequence | MDRLFSEIAM HQALGRAIDH LGQPRFWRFL VLLLNEMVPF DNALATAIGR DGVPLVLDEY DTGGTDSASP VPLYLNGLYL LDPFLQAAHD GLADGCYRLE EVAPDLFRQS EYFLSYFRDA VGDDEIQILL RPNRDLLLSL SLGAATRFDV EPLGKLTAAM PWVLAAIRQH WRLVGDAARA TPDDDLGARV EQALARFGAG VLTEREMSIA RMVLRGNSSK AIAERLAISP ETVKVHRRHL YAKLGISSQP ELFSRFIHAL GEHASG
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