Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4191 |
Symbol | |
ID | 6180164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1241636 |
End bp | 1243288 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683960 |
Product | acyl-CoA synthetase |
Protein accession | YP_001810871 |
Protein GI | 172063220 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.408436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.60064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGA TGTTCGAGGC CGGACTCGGC CGCCGCGACG CCAACTACGT GCCGCTCACA CCGATCGATT TTCTGGTCCG CGCGGCCGAA GTCTACGGCG AGCGCCTCGC GATCGTGCAC GGCGACGTGC GGCGCACGTG GGGCGAGACC CATACGCGGG CGAAGCAGCT CGCCAGCGCG CTCGCGCAGG CCGGCGTCGC GCGCGGCGAC ACGGTCGCGG CGCTGCTGCC GAACATCCCG GCGATGGTGG AGGCGCACTT CGGCGTGCCG ATGGCCGGCG CCGTGCTCAA TACGATCAAC ACGCGGCTCG ACATTTCGTC GGTGCTGTTC ATGCTGCGTC ACGGCGAAGC GAAGGTGCTG ATCGTCGACA CCGAATACGC GGATCTCGCG CACCGCGCGG CGCGCGAAGT GCCGGGCCTG AAGATCGTCA GCGTCGCCGA CGCGATGCCG GCTGACCCCG CGCGCTTCGC GGGCGCGACC GACTACGAAG CGTTCGTGGC GGGCGGCGAT CCCGACTACG CGTGGACGCC GCCCGCCGAC GAATGGGATG CGATCGCGCT GAACTACACG TCCGGCACGA CGGGCGACCC GAAGGGCGTC GTCTATCACC ATCGCGGCGC GTATCTCGCG GCGATCAGCA ACATTCTCGA ATGGGACATG CCGAAGCACT CGGTGTATCT GTGGACGCTG CCGATGTTCC ACTGCAACGG CTGGTGCTTT CCGTGGGCCG TCGCGGCGCG CGCGGGCGTG AACGTCTGCC TGCGCAAGTT CGACGCGAAG ACGGTGTTCG ACCTGATCCG CAGCGAACGC ATCACGCATT ACTGCGGTGC GCCGATCGTG CAGAGCGCGA TCGCGAACGC GCCGGCCGAG TTCCGCGCGG GCATCGATCA CACGGTGCAC GCGATGGTCG CCGGCGCGGC GCCCGCGCCG GCCGTGATCG CGAAGATGAA GGAGATCGGT TTCGACCTGC TGCACGTGTA CGGGCTGACC GAGGTCTACG GCCCGGCGAC CGTGTGCGCG AAGCAGGCGC ACTGGGACGC ATTGCCCGAC GACGAGCGTG CGCGCCTGAA TGCGCGGCAG GGCGTGCGCT ATCACCTGGA AGCGGGCGCG ACGGTGCTCG ACCCGGACAC GATGGCGCCG GTGCCGGCCG ACGGCGAGAC GCTCGGCGAG ATCATGTTCC GCGGCAACAT CTGCATGAAG GGCTACCTGA AGAATCCGAA GGCCACCGAC GAGGCGTTTC ACGGCGGCTG GTTCCATACG GGCGATCTCG GTGTGCTGAC GCCGGACGGC TATATCCGCA TCAAGGATCG CCGCAAGGAC ATCATCATTT CCGGTGGCGA GAACATCTCG AGCATCGAGG TCGAGGATGC GCTGTACCGG CATCCGGCCG TCGCGGTCGC GGCGGTGGTG GCGATGCCCG ACCCGAAGTG GGGCGAGGTG CCGTGCGCGT TCGTCGAGCT GCGCGAAGGC GCGAGCGCGA CCGAGGAGGA GATCGTCGCG CACTGCAAGC AGCTGCTCGC GGGATTCAAG GTGCCGAAGG CCGTGCGCTT CGGCGAGCTG CCGAAGACGT CGACCGGCAA GATCCAGAAA TTCCAGCTGC GCAACGAGGT CGGATCGGAC AAGGCGATCG ATCTGGCGGG GGACAAGAAG TAG
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Protein sequence | MTQMFEAGLG RRDANYVPLT PIDFLVRAAE VYGERLAIVH GDVRRTWGET HTRAKQLASA LAQAGVARGD TVAALLPNIP AMVEAHFGVP MAGAVLNTIN TRLDISSVLF MLRHGEAKVL IVDTEYADLA HRAAREVPGL KIVSVADAMP ADPARFAGAT DYEAFVAGGD PDYAWTPPAD EWDAIALNYT SGTTGDPKGV VYHHRGAYLA AISNILEWDM PKHSVYLWTL PMFHCNGWCF PWAVAARAGV NVCLRKFDAK TVFDLIRSER ITHYCGAPIV QSAIANAPAE FRAGIDHTVH AMVAGAAPAP AVIAKMKEIG FDLLHVYGLT EVYGPATVCA KQAHWDALPD DERARLNARQ GVRYHLEAGA TVLDPDTMAP VPADGETLGE IMFRGNICMK GYLKNPKATD EAFHGGWFHT GDLGVLTPDG YIRIKDRRKD IIISGGENIS SIEVEDALYR HPAVAVAAVV AMPDPKWGEV PCAFVELREG ASATEEEIVA HCKQLLAGFK VPKAVRFGEL PKTSTGKIQK FQLRNEVGSD KAIDLAGDKK
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