Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4155 |
Symbol | |
ID | 6180201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1196325 |
End bp | 1197248 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641683924 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001810835 |
Protein GI | 172063184 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.532001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.288769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTA GCGATATCGA CGCTTTTGCA GCGGTCATCC GCTGCCAGAC GCTCAGCCAG GCCGCGACCG AGCTCGGGAT GACGCAGCCC GCGGTCACGC GGCGCATCCA GAACCTCGAG GAAGCGCTCG GCGTGACGCT GCTCGATCGC AACACGAAGC CGCCGCGCCC GACCGACATC GGCCGGCAGG TGTTCGAGCA GTGTCGCGCG ATCCTGCGCG AAGTCGATGC GCTGCGCGAA CTGACGGCCG GCAAGCGGCC GCCCGCCGGC GAATTCCGCG TGGGCCTCAC GCAGGGGCTC GGCGAGCTGA TGCTGCCCGG CCTGATCGCG CGGCTGGCCG CGCAATGGCC GGCGCTCACC ACGCAGGTCA CGACCGCCTG GGGCGGCACG CTCGTCGAAC GCGTCGCGCG CCGCGAGCTC GATGCGGCGC TGGTGTTTCT GGCCCGCGAG ATGGTGCTGC CGCCGCAGGT CGCGGGCGAA CGGCTGCTGG CCACGCGGCT CGTCGCGGTC GGCCGCAAGG GCGACTGGCC GCGCCGCGGC TACCGGCTTG CCGACTGCCA GGCGCGCGGC TGGGTGCTCA ATCCCGACGG CTGCGGGTTT CGCGCGGGCC TGCGCCGGGC GCTCGACGCG CAGGGGCTGC CGATGCCGGT CACGCTCGAC ACTTACGGCC GCGACCTGCA GTTGCAGAGC GTCGCGAACG GCTTCGGCAT CGGGTTGATG CCGCTGCCGC TGCTCGACGG CAGCCCGCTG CGCGACGCGC TCGACATCGT GCCGCTCGCC GATTTCAAGC CGCAGATCGA TATGTGGCTG CTGCACCGGC AGGACGCCGC GCGCTTCGCG GCGCCGCTCG CGGCCCTGGC CGCGCACGCA CGCACGGCGT TCGCGCTGCC CGCGGATGCC GCCGCGCAGG ACGAGGCCGC TTGA
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Protein sequence | MKISDIDAFA AVIRCQTLSQ AATELGMTQP AVTRRIQNLE EALGVTLLDR NTKPPRPTDI GRQVFEQCRA ILREVDALRE LTAGKRPPAG EFRVGLTQGL GELMLPGLIA RLAAQWPALT TQVTTAWGGT LVERVARREL DAALVFLARE MVLPPQVAGE RLLATRLVAV GRKGDWPRRG YRLADCQARG WVLNPDGCGF RAGLRRALDA QGLPMPVTLD TYGRDLQLQS VANGFGIGLM PLPLLDGSPL RDALDIVPLA DFKPQIDMWL LHRQDAARFA APLAALAAHA RTAFALPADA AAQDEAA
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