Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3897 |
Symbol | |
ID | 6180296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 898830 |
End bp | 900119 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641683669 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001810580 |
Protein GI | 172062929 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.415148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGAAA CGATTGGATG CCTCATCTTC GGGGCCCTAC TGATTTTCAT GGGACTCGTC GGATCGTCGC TTAAGCGCTT GCCGCTGAGC GCGGCCATGG TGTATCTCGG CATCGGCTTT CTGGTCGGGC CGTCCGGTAT CGGTTTCCTG GCGATGACAT TGCCTGATGA CGTCACGCGC TTGCGCATCG CTGCCGAAAT CGGCTTGCTG ATCTCGCTGT TCGCGATCGG CCTGAGGCTG CGTGTCCCGC CCGCCGATCG CCGCTGGATG CTGCCGCTGC GGCTTGGCGT CGTCGCGATG ATCTTCACCG TCGCGTCGAT CGCCGCGCTT GGCATGCTGG TGCTGCATTT GAGTCTCGGC GTCGCGGTGC TGCTGGGTGC GATGATCGCG CCGACGGATC CCGTGCTCGC TCATGACGTC GGCGTGCGCG ACGCGGGTGA TGTCGAACTG GTGCGCTTTT CGTTGTCTGG CGAAGGCGGG ATCAACGACG GCACGGCCTA TCCGTGCGCG GTGCTCGGCC TGCTATTGTG CGATTCCAGC GCGACGTCGG CGCTTCACTG GAACATGGTC GGCGGCGTTG CATGGGGTAT CGCCTCCGGT GTGGGCGTCG GCTGGTTGCT TGGCTTGGCC ACCGCCCGGC TCGTCGCATT TCTGCGCAGC CGTCACGGAC AGGCGCTCGG CCTCGAAGGG TTTTTCGCGC TGGGCCTGAT CATGCTGTCA TATGGCGCGG CGCTCGCCGT TCACGGCTAC GGGTTCCTGG CCGTGTTCGC TGCGGGCGTC GCGATGCGAC GCGTCGAGCA TCGCACGAGC GGCCGGAAGA CGTCGAAGGA GACGGTCGGC GTCGTGGACA GCGAGGATGT CGAAGCCACC TCCACCAACC CCGACAAAGC TCATGCCTTC GTCGCTGAAT CGGTCATGGG ATTCACGATC GAGCTGGAAC ACATCGCCGA AGCCGTGCTG ATCCTGCTGA TTGGCGCGCT CGTCTCCCGC TATTGGGCCG ATATGCTCAC CTGGACAGGC GCGGCCGTGG TTGCGTCACT GCTGCTCGTC ATCCGGCCGA CCGCTACCTG GCTTGCGCTG ATCGGTTCCC GGGCGTCGCG CCACCAGCGC CGGCTGATCG GCTGGTTCGG CATCCGTGGC GTGGGTTCCC TGTATTACCT GATGCTGTCC CTCGAGCAAG GGCCGCGCGC GGAACTGTTG CCGTTGGTTC CGCAAGTACT GGCCATCATC GCCGTGTCGA TCGTGCTGCA CGGCATTTCG GCCACGCCGC TTATGCGCCG CTATGCGTAA
|
Protein sequence | MTETIGCLIF GALLIFMGLV GSSLKRLPLS AAMVYLGIGF LVGPSGIGFL AMTLPDDVTR LRIAAEIGLL ISLFAIGLRL RVPPADRRWM LPLRLGVVAM IFTVASIAAL GMLVLHLSLG VAVLLGAMIA PTDPVLAHDV GVRDAGDVEL VRFSLSGEGG INDGTAYPCA VLGLLLCDSS ATSALHWNMV GGVAWGIASG VGVGWLLGLA TARLVAFLRS RHGQALGLEG FFALGLIMLS YGAALAVHGY GFLAVFAAGV AMRRVEHRTS GRKTSKETVG VVDSEDVEAT STNPDKAHAF VAESVMGFTI ELEHIAEAVL ILLIGALVSR YWADMLTWTG AAVVASLLLV IRPTATWLAL IGSRASRHQR RLIGWFGIRG VGSLYYLMLS LEQGPRAELL PLVPQVLAII AVSIVLHGIS ATPLMRRYA
|
| |