Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3790 |
Symbol | |
ID | 6179276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 772713 |
End bp | 773636 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683561 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001810473 |
Protein GI | 172062822 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.98544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAA TCAATCAGCA GCGGCTGCGC TACTTCCGCG CAGTGCTCGA GCAAGGGACC ATCCGTGGCG CCGCCGAGAG CCTGAACACC TCGCCGTCGG TGATTACCCG GCAGATCCGG CTGCTCGAGG ACGAGCTTGG CGCGACGCTG TTCGAGCGCC AGGCGCGCGG CGTCAGGCCG ACCGAAGCCG CCGCGCACCT GCTCGAGTTC TGGCGCGGCT ACCGCTCGCA TCAGGAGCGG CTCGAGGATC AGCTCCACGC GCTCAAGGGC CTGAAGCAGG GGCAAGTCCA ACTGGTCCTG AGCGAAGGGT ATGTGGATGC GCTGGTCAAC GAGGTGCTGG CGCCGTTCTG TGCGCAGTAC CCGTTGCTCG ACATCGGAAT GGAGATCCTC GGAGTCGATC AGGTGCTCGA AGCCGTGGCG GAAAGCCGCG CGCACCTCGG GCTTGCCTTC AACCCGCCGC CGCACCCGCG TATCGAGTAT CTGGCGAGTT CGTCGCAGGC GGTCGGGCTG CTGGTGCGGT CCGGCCATCC GCTGGCATTG CGCGGCGGCC CGGCCAGCGT CGAGGACATG TTGTCGTGGC CGCTGGCCAT GATGCCGGCA TCGTTCGGCG TCGGCCATGC GGCCAAGATG CTCGAATTCG CGGAGAACAT TACGATACGG CCGAAGCTGG TCACCAATTC GCTCACGGCG CTCAAGCAGT TCGTCGCCTA CGAAAACTAC ATGACGCTGA TCGGCGGCGA ATTCGCGGCG TATCGGGAGA TCGCCGCCGG CACGCTCACG GTGGTGCCGA TCGATCATCC GCTCTTCAAG GGCACCCAGG CGCGGTTGCT CGCGAAGGCA GGGCGGCCGT TACCGGCGGC CGCCCTCAAG CTCCTCGAAC ATATTCTGCG GGACATGCCG ATGTTCGCGC GGGGCGGCGA GTAG
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Protein sequence | MREINQQRLR YFRAVLEQGT IRGAAESLNT SPSVITRQIR LLEDELGATL FERQARGVRP TEAAAHLLEF WRGYRSHQER LEDQLHALKG LKQGQVQLVL SEGYVDALVN EVLAPFCAQY PLLDIGMEIL GVDQVLEAVA ESRAHLGLAF NPPPHPRIEY LASSSQAVGL LVRSGHPLAL RGGPASVEDM LSWPLAMMPA SFGVGHAAKM LEFAENITIR PKLVTNSLTA LKQFVAYENY MTLIGGEFAA YREIAAGTLT VVPIDHPLFK GTQARLLAKA GRPLPAAALK LLEHILRDMP MFARGGE
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