| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3662 |
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| Symbol | |
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| ID | 6179656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 617363 |
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| End bp | 618496 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683432 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_001810345 |
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| Protein GI | 172062694 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.246174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.215433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCAA CTGCCGCCAC CATCGAGCGC ATCGACACGC TGCTCGTCGA CGTGCCGACG
ATCCGGCCCC ACAAACTGTC GGTCGCCACG ATGAATTGCC AGACCCTCGT GCTGGTCCGC
GTTCGATGCA CGGACGGTAT CGAAGGCGTC GGCGAGGCGA CCACGATCGG CGGTCTCGCG
TATGGCGAGG AGAGCCCCGA GAGCATCAAG GTCAACATCG ACACCTACTT CGCGCCGCTG
CTGCAAGGCA TGGACGCAAC ACGCCCAGGC GCCGCGATGG CGCGTGCGCG CAAGCTGTTC
CAGGGCAACC GGTTCGCGAA GTGCGCGATC GAAACCGCGC TGTTCGACGC GCAGGCGCGC
CGCCTCGGCG TGCCGCTGTC GGAACTGTTC GGCGGCCGCA CGACGGATGC GGTCGACGTC
GCATGGACGC TCGCGAGCGG CGACACGCAG CGCGACATCG CGGAAGCCGA GGCGATGCTC
GACGCGCGCC GCCATCGCGC ATTCAAGCTG AAGATCGGGT CGAACGCGGT CGACGACGAC
GTCGCGCACG TGATCGCGAT CAAGCGCGCG CTCGGCGAGC GCGGCGACGT TCGCGTCGAC
GTGAACCAGG CATGGAGCGA AACCGACGCG ATCCGGGCCG GCGCACGCCT CGCGGACGCC
GGCGTGAGCC TCGTCGAGCA GCCCATCGCC GCGACCAATC GCGCGGGGTT GAAACGCCTC
ACGCAGCTCG CGCGGATTCC GATCATGGCC GACGAAGCGC TGCACGGCCC CGTCGACGCG
TTCGCGCTCG CGCGGGACCG CGCGGCCGAC GTGTTCGCGG TGAAGATCGC GCAATCGGGC
GGCCTGCTCG GCGCGGCGAG CGTCGCATCG ATCGCGTCGG CGGCCGGCAT CGACCTGTAC
GGCGGCACGA TGCTCGAGGG CGCGGCCGGC ACGATGGCGT CCGCGCAGCT GTTCAGCACG
TTCGGCTCGC TGAAATGGGG CACCGAGCTG TTCGGCCCGC TGCTGCTCAC CGAGCAGATT
CTCGTCGAGC CGCTGCGTTA CCAGGATTTC AAGCTGCACC TGCCGGCGAC GCCCGGCCTC
GGCATCACCT TCGACTGGGC CCGCATCGAA CGGATGCGAC GCGACGCCCG CTGA
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| Protein sequence | MIATAATIER IDTLLVDVPT IRPHKLSVAT MNCQTLVLVR VRCTDGIEGV GEATTIGGLA
YGEESPESIK VNIDTYFAPL LQGMDATRPG AAMARARKLF QGNRFAKCAI ETALFDAQAR
RLGVPLSELF GGRTTDAVDV AWTLASGDTQ RDIAEAEAML DARRHRAFKL KIGSNAVDDD
VAHVIAIKRA LGERGDVRVD VNQAWSETDA IRAGARLADA GVSLVEQPIA ATNRAGLKRL
TQLARIPIMA DEALHGPVDA FALARDRAAD VFAVKIAQSG GLLGAASVAS IASAAGIDLY
GGTMLEGAAG TMASAQLFST FGSLKWGTEL FGPLLLTEQI LVEPLRYQDF KLHLPATPGL
GITFDWARIE RMRRDAR
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