Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3508 |
Symbol | |
ID | 6179943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 438844 |
End bp | 439902 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683277 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001810191 |
Protein GI | 172062540 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.878691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0398628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCT GGGACTTCAC CCGGAGTCCG GCCAGTGCCC GGCTGCTGGT CGATTTCGGC GACGAGCGCG GCGTGTCGCG CACGAAGCTG CTGGCCGGCA CGGGCCTCGC GGACGCGCAG CTCGACGATC CGAACGTCGA GGTGACGGCC GCGCAGGAAC TGCGGCTGAC CGGCAATCTG CTGCGCGCGC TCGGGCGTGC TCCGGGCCTC GGGTTCGAGG TCGGGCAGCG CTATCACTTC TCCGCCTACG GCGTGTGGGG CTACGGGCTG ATCGCGAGCG CGACCGCGCG CGACGCGCTG GCGCTCGCGA TGCGCTTCCT GCCGCTCACG TATGCGTTCA CGGTGATCAC GTACCGCGAG GAATCGCACG CATGCGTGCT CAATTTCGGC GCGCCGGAGC TCGATGCCGA CCTGAGCCGG TTCCTCGTCG AACGCGACAT GACGGCCGCC GTCGTGCTGC TGCAGGAAAT CGGCGGCGAC GATTTCGCGT TGTCGCGCTT CACGATGCAG GCCGAGAGCG CGGGGAGCGT AGCCACGTCC ACACGCGCAC CCGCACCGCG CATTGCCGGT GTCGAACCCG TGTTCGGCGC GCGTGCGAAC AGTCTCGCGT TCGACCGAGG CTTTCTCGAC CGGCCGCTGC CGCATGCGAA CCCGCTGACG GTTTCGATGT GCGAGCAGAT GTGCGTCCAG CTGGTCGAGG CGCGGCGCGC GCGGGTCGGC ACGTCGGAGA TGGTGCGGCA ATACCTGACG GCGACGCCCG GCAACGTGCC GTTCTCGCTC GACGACATCG CGCGGCTGAT GAACACGAGC CCGCGCACGC TGAAGCGCCG GCTGCAGGAG GAAGGCACGA CGTTTCGCAC GCTGCTCGCG CAGGCGCGCG GCGCGATGGC CGAGACGCTG CTCGGCGATG CGCACCTGTC GCTGACGGAA GTCGCCGAGC GGCTCGGCTT CAGCGACCTG TCGAGTTTCT CGCAGGCGTT CAAGCGCTGG TATGGTGTGC CGCCGGGCAC CTACCGCAGC GGCCTGCTGC GCGACGGCGC CTGCAACGGC GCCGCGTAA
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Protein sequence | MSFWDFTRSP ASARLLVDFG DERGVSRTKL LAGTGLADAQ LDDPNVEVTA AQELRLTGNL LRALGRAPGL GFEVGQRYHF SAYGVWGYGL IASATARDAL ALAMRFLPLT YAFTVITYRE ESHACVLNFG APELDADLSR FLVERDMTAA VVLLQEIGGD DFALSRFTMQ AESAGSVATS TRAPAPRIAG VEPVFGARAN SLAFDRGFLD RPLPHANPLT VSMCEQMCVQ LVEARRARVG TSEMVRQYLT ATPGNVPFSL DDIARLMNTS PRTLKRRLQE EGTTFRTLLA QARGAMAETL LGDAHLSLTE VAERLGFSDL SSFSQAFKRW YGVPPGTYRS GLLRDGACNG AA
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