Gene BamMC406_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3490 
Symbol 
ID6180551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp417194 
End bp419950 
Gene Length2757 bp 
Protein Length918 aa 
Translation table11 
GC content72% 
IMG OID641683259 
Productmolecular chaperone-like protein 
Protein accessionYP_001810173 
Protein GI172062522 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0310238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT ATACCGTCGG CATCGACCTC GGCACGAGCA ACACGGTCGT CGCATACGTC 
GAGGCCGGCT CCGACGCGAT CCGCGTGTTC GACGTCGATC AGCTGGTCGG CCCCGGCGCG
GTGGCCGCGC AGCCGTTGCT GCCGTCGGTG CGCTATCACC CGGCGGCGGG CGAGCTGCCG
CCGGACGCGC TGCGTCTGCC GTGGGCGGCT GCTCCGAAGG CCGGCGCGGC CGCGGCCGAC
GTGCCGCCGG CCGTGATCGG CCGTTATGCG CGCACGCTCG GCGCACAGGT GCCGGGCCGG
CTCGTCACCA GCGCGAAGAG CTGGCTGTCG CACGCATCGG TCGACCGGCT CGCGGCGATC
CTGCCGTGGG GCGCGGCCGA CGGCGTCGAC AAGGTGTCGC CGGTCGACGC GAGCGCGAGT
TATCTCGCGC ACGTGCGTGC CGCGTGGGAT GCCCGCTTTC CCGATGCGCC GCTCGCGAAG
CAGGACGTCA TTCTGACGGT GCCGGCCTCG TTCGACGACG GCGCACGCGC GTTGACGGTC
GAGGCTGCCA AGCGCGCGAA ACTGCCGGCG CTGCGCCTGC TCGAAGAACC GCAGGCCGCG
TTCTACGACT GGTTGTACGG CCAGCGCGCG ACGTTGCGCG ACACGTTCGC CGCCCCGCGC
CGCGTGCTGA TCTGCGACGT CGGCGGCGGC ACGACCGATC TCACGCTCGT CGATGTCGCG
CCCGGCGAGG AGGGCGAACC GACCTTCACG CGCGTCGGCG TCGGCAATCA TCTGATGCTC
GGCGGCGACA ACATGGACCT CGCGCTCGCG CGCCTGGTCG AGCCGCGGCT GACCGAGCCC
GGCACGCGGC TGTCCGCCGC GAGCCTGTCG CAACTCGTCG AACGCTGCCG CGCCGCGAAG
GAGCGGCTGC TCGGCGACGA CGCGCCGGCG TCCGTCACCG TGACGCTGCT CGGCGCGGGC
AGCAAGCTGG TCGGCGGCGC GCGCTCGGCG GAGCTGACGC GGCAGGAAGT CGAGCAGGTC
GTCGTCGACG GTTTCTTTCC GCAGGTCGAG GCGGGCGAGC TGCCGCGCCG TGCGCGGGCC
GCGATCGTCG AATTCGGCTT GCCGTATGCG AGCGATCCGG GCGTCACGCG CCACGTCGCC
GCGTTCCTGA ACCGCCATGC GGAAGGTCCG CTGCCCGACA CGCTGCTGCT CAACGGCGGC
GTGTTCCGCG CGGGCGCACT CGCCGGCCGC CTCGCGCAGA CGCTCGGCGC ATGGCGCGGC
GCACCGCTCG ACGTGCTGCA CAACGCACAT CCGGACGTGG CCGTCGCGCG CGGCGCGGTG
GCGTATGGCC TGGCCCGGGC CGGGCATGCG CCGCGCATCG GCGGCGGCTC CGCGCGCAGC
TATTTCCTCG TGCTCGACGA CGGTGAGGGT GACGGCGACG CCGCGCCGCG CGGCGTCTGC
CTGCTGCCGC GCGGTGCCGA GGAAGGCCGC GAGATCCGGC TCGAGGAGCG CACGTTCGCG
CTGCAGCTCG GGCAGCCGGT GCGTTTCCAC CTCGTGTCGA CGGTGGCCGA GACCGCGTAC
CGGCCCGGCG ATCTCGTCGA GCTGGACGGC GGCGATTTCG TGCGGCTGCC GCCGATCGCG
ACGGTCGTTG ACCGGCAGGC CGGCGGCGAC GCACGCGAAA CGCCGGTGAA ACTCACCGCG
TCGCTGACCG AGGTCGGCAC GCTCGAAATG CACTGCATCG CGATTGACGA TGCAGCGCAG
CGCTGGCGGC TCGAATTCCA GTTGCGCGGC GATGCGCCCG CGCAGGGCGA CGGCGCCGCG
CCGGCGCGGC ATCCGCGTGT CGACCACGCG ATCGAGATGA TCGACCGCTC GTTCGGCAGC
AAGGCCGCCG GCGTCACGCC GAAGGACACG CGACGGTTGC GCGCGCAACT TGAACAGGTG
CTCGGTCCGC GCGACGAGTG GGACGTCGCG CTCGCGCGCG AACTGTTCGA CGCGTTGCTC
GCACGGGCGC GTCGTCGGCG CCGCTCGGCC GATCACGAAC GCGCATGGCT GAACCTGGCC
GGCTATTGCC TGCGCCCCGG CTTCGGCCAT CCGCTCGATG CATGGCGCAT CGAGCAGCTG
TGGCCGCTGT TCGACGACGG GATTCAATAC GTGAACGACG CGCAGGTGTG GTCGGAGTGG
TGGACGCTGT GGCGGCGCGT GGCCGGCGGC CTCGACGACG ATGCGCAGAC GCAGGTGCGC
GACGCGATCG CCTTCCTCGA ACGGTCCGAC GACAAGCGCC GCAAGCTGCC GTTCGACCCG
GCCAAGGTCG GGCCGGCCGA CATGACGCGC TTGTCGGCGT CGCTCGAACG ATTGCCGGTC
GAGCGCAAGG TGGAACTGGC CGAGCGATTG CTCGTGCAAT TGCAGAAGCC GGCCGAGCGC
ACGCTGTGCG CGTGGGCGCT CGGGCGGATC GGTGCGCGCC GGCCGTTCTA CGGCAGCGCG
CACAGTGTCG TGCCGGCCGG GATCGCGAAC CGCTGGCTCG ACGCGCTGTT CGCGCTGGAC
TGGAAGCAGG TCGAGCCCGC GGCCTTCGCG GCCGCGCAAA TCGCGCGGAT GACGGGCGAC
CGCGAACGCG ATCTGCCGGA CGACACGCGC GAAGCGGTGA TCAAGCGTCT GTCGGCCGCG
AATGCGTCGG CGGCGTGGAT CGACATGGTG CGCGAAGCGA TCGCATTCGA CGAAGCCGAC
ACGGCGCGCG TGTTCGGCGA GACGCTGCCG GCCGGGTTGA AGCTGCTGGG TGGGTGA
 
Protein sequence
MKRYTVGIDL GTSNTVVAYV EAGSDAIRVF DVDQLVGPGA VAAQPLLPSV RYHPAAGELP 
PDALRLPWAA APKAGAAAAD VPPAVIGRYA RTLGAQVPGR LVTSAKSWLS HASVDRLAAI
LPWGAADGVD KVSPVDASAS YLAHVRAAWD ARFPDAPLAK QDVILTVPAS FDDGARALTV
EAAKRAKLPA LRLLEEPQAA FYDWLYGQRA TLRDTFAAPR RVLICDVGGG TTDLTLVDVA
PGEEGEPTFT RVGVGNHLML GGDNMDLALA RLVEPRLTEP GTRLSAASLS QLVERCRAAK
ERLLGDDAPA SVTVTLLGAG SKLVGGARSA ELTRQEVEQV VVDGFFPQVE AGELPRRARA
AIVEFGLPYA SDPGVTRHVA AFLNRHAEGP LPDTLLLNGG VFRAGALAGR LAQTLGAWRG
APLDVLHNAH PDVAVARGAV AYGLARAGHA PRIGGGSARS YFLVLDDGEG DGDAAPRGVC
LLPRGAEEGR EIRLEERTFA LQLGQPVRFH LVSTVAETAY RPGDLVELDG GDFVRLPPIA
TVVDRQAGGD ARETPVKLTA SLTEVGTLEM HCIAIDDAAQ RWRLEFQLRG DAPAQGDGAA
PARHPRVDHA IEMIDRSFGS KAAGVTPKDT RRLRAQLEQV LGPRDEWDVA LARELFDALL
ARARRRRRSA DHERAWLNLA GYCLRPGFGH PLDAWRIEQL WPLFDDGIQY VNDAQVWSEW
WTLWRRVAGG LDDDAQTQVR DAIAFLERSD DKRRKLPFDP AKVGPADMTR LSASLERLPV
ERKVELAERL LVQLQKPAER TLCAWALGRI GARRPFYGSA HSVVPAGIAN RWLDALFALD
WKQVEPAAFA AAQIARMTGD RERDLPDDTR EAVIKRLSAA NASAAWIDMV REAIAFDEAD
TARVFGETLP AGLKLLGG