Gene BamMC406_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3476 
Symbol 
ID6179351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp397932 
End bp398399 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content65% 
IMG OID641683245 
ProductMarR family transcriptional regulator 
Protein accessionYP_001810159 
Protein GI172062508 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.125769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA ATGAAAAGCT TCCTTTCGAA ACGACGCTGA TGGTGCGCGA TTGCTGCCTG 
TGCCTGCACA TTCAGCGCGC GGCGCGCAAT CTCGCGCGCA TCTTCGACGA TGTGCTGCGT
CCGCTGGATC TCACCAACGG CCAGTTTTCG CTATTGATGT CGCTGAACCG GCCGAAACCG
GCCGCGATGA AATCGGTCGC GTCGCTGCTC GCGATGGATC GCACCACGCT GACCGCCGCG
TTGAAACCGC TCGAGCGGCG CGGGCTGGTC ACGATCGTGC AGGATCCGGA CGACAAGCGC
AGCCGCCTGC TCGAACTCAC GCCGGCCGGC CATCGTCTGC TGACCGACGC GTTTCCGCTG
TGGCAGCAGG CGCACGCCGA GATCGAACAG CCGTTCGCGG CCGGAGAAGT CGATGTGTTG
CGCGATCAGT TGCGCCTGCT GTCGGAAGAC CCGGCTACGC GCGGCTGA
 
Protein sequence
MARNEKLPFE TTLMVRDCCL CLHIQRAARN LARIFDDVLR PLDLTNGQFS LLMSLNRPKP 
AAMKSVASLL AMDRTTLTAA LKPLERRGLV TIVQDPDDKR SRLLELTPAG HRLLTDAFPL
WQQAHAEIEQ PFAAGEVDVL RDQLRLLSED PATRG