| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3312 |
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| Symbol | |
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| ID | 6181463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 224464 |
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| End bp | 226185 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683084 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001809998 |
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| Protein GI | 172062347 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.653262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0298964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGAC AGACGATGGC GGAATACCTG GCGAAGACGC TGGCGGCAGC GGGCGTCGAG
CGCATCTGGG GCGTGACGGG CGACAGCCTG AACGGGTTGT CGTTCAGCCT GAGCCAGATG
GGCTCGATCC GCTGGATGCA TACGCGTCAC GAGGAAAGCG CCGCGTTCGC GGCCGGCGCG
GATGCGGCAT CGACCGGCCG GCTCGCGGTA TGCGCGGGCA GTTGCGGCCC CGGCAACCTG
CACCTGATCA ACGGCTTGTA CGACTGCCAC CGCAATCACC AGCCGGTGCT CGCGATCGCC
GCGCACATTC CGTCGACGGA GATCGGTCTC GGCTACTTCC AGGAAACCCA TCCGCAGGAA
CTGTTCCGCG AATGCAGCCA TTTCGCGGAA CTCGTGACCA ACGCGTCGCA GTTCCCGCGC
GTGCTCGCGC GCGCGATGCG CACGGCGATC GAGGAACGCG GCGTCGCGGT GATCGTGCTG
CCGGGCGATA TCGCGCTCGG CGACGGCCCC GAAGAAGCGC CCGCGTGGAG CGAGTCGGCG
CCGCCGTCGA TCCTGCCGGC CGACGCCGAT CTCGACCGGC TCGCGGCGCT GCTCAATGCA
TCGGACGCGG TCACGCTGCT GTGCGGCAGC GGCACGCAGG GCGCGCACGA CGAAGTGGTC
GCGCTGGCCG ACACGCTCGG CGCGCCGGTC GTGCATGCGC TGCGCGGCAA GCAGTTCGTC
GAATGGGACA ACCCGTTCGA CGTCGGGATG ACGGGGCTGA TCGGCTTCAG CTCGGGCTAT
CACGCGATGG AATCGTGCGA CACGCTGCTG ATGCTCGGCA CGGATTTCCC GTACCGGCCG
TTCTATCCGG CGAACGCGAA GATCGTGCAG ATCGACTGGA AGGGCTCGCA GCTCGGACAT
CGCGCGCCGC TCGCGCTCGG GCTCGTCGGC ACCGTGAAGG AAACGATCGC GGCGCTGCTG
CCGCGCCTCA CGCGCAAGAC GCAGCGGCGC TTCCTCGAGA ACGCGCTGAA GCACTACGCG
GCCGCGCGCA AGGGGCTCGA CGATCTCGCG GTGGCGGAGC CGCCGGGACG CGCGATCCAT
CCGCAATATC TGACGAAGAT CGTCGACGAA GTCGCGGCCG ACGATGCGAT CTTCACGGCC
GACGTCGGCA CGCCCACATT GTGGGCTGCG CGCTACCTGA CGATGAACGG CAAGCGCCAG
CTGCACGGCT CGTTCAATCA CGGCTCGATG GCCAACGCGA TGCCGCAGGC GCTCGGCGCG
CAGGGCGCGC ATCCGGGGCG GCAGGTCGTG TCGCTGTCGG GTGACGGCGG GCTGTCGATG
CTGCTCGGCG ATCTGCTGAG CGCGCGGCAG CTCAACCTGC CGATCAAGAT CGTCGTCTAC
AACAACAGCC TGCTCGGCTT CGTGTCGATG GAACTGAAGG CGGCCGGCTA TCTCGATACC
AACGTCGACC TGAGCCCGAC CGATTTCGCG GCGATCGCGA AGGGCGCGGG GATCTTCAGC
GTGCGCGTCG AGCATTCGGA GAACGTCGAG CACGCGCTGC GCACCGCGTT CGCGCACGAC
GGGCCGGCGG TCGTCGACGT CGTCACGTCG AAGTACGAAC TCGCGATGCC GCCGAAGATC
GAGATCGCGC ATGCGAAAGG GTTCAGCCTG TTCATGCTGC GCGCGATCCT GAGCGGGCGC
GGGGACGAGA TCGTCGAACT GGCGCGGACC AACCTACGGT GA
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| Protein sequence | MARQTMAEYL AKTLAAAGVE RIWGVTGDSL NGLSFSLSQM GSIRWMHTRH EESAAFAAGA
DAASTGRLAV CAGSCGPGNL HLINGLYDCH RNHQPVLAIA AHIPSTEIGL GYFQETHPQE
LFRECSHFAE LVTNASQFPR VLARAMRTAI EERGVAVIVL PGDIALGDGP EEAPAWSESA
PPSILPADAD LDRLAALLNA SDAVTLLCGS GTQGAHDEVV ALADTLGAPV VHALRGKQFV
EWDNPFDVGM TGLIGFSSGY HAMESCDTLL MLGTDFPYRP FYPANAKIVQ IDWKGSQLGH
RAPLALGLVG TVKETIAALL PRLTRKTQRR FLENALKHYA AARKGLDDLA VAEPPGRAIH
PQYLTKIVDE VAADDAIFTA DVGTPTLWAA RYLTMNGKRQ LHGSFNHGSM ANAMPQALGA
QGAHPGRQVV SLSGDGGLSM LLGDLLSARQ LNLPIKIVVY NNSLLGFVSM ELKAAGYLDT
NVDLSPTDFA AIAKGAGIFS VRVEHSENVE HALRTAFAHD GPAVVDVVTS KYELAMPPKI
EIAHAKGFSL FMLRAILSGR GDEIVELART NLR
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