Gene BamMC406_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2960 
Symbol 
ID6176715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3282116 
End bp3283096 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID641682736 
ProductATPase central domain-containing protein 
Protein accessionYP_001809652 
Protein GI172062000 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.788064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG CGATGGTGAA ACAGGAACTG GCGGTGGCAT CCTTCAGCAC GGTGTACGAC 
CTCGAGCAGG TCGAGACCGC GCTCAACGAC TTGAACGAGA GCGCGAGCGA CGCACTGCGC
GCCACCTACG AGCGGATGCT CAAGACGGGC AATCTGCGCT TTTGCGTGAA GCCGAACCGG
ATGCCGTCGT TCGACGAACT CGGCGACGCG CTGCCCAATT TCACCGAGCC GCTCGGCGAC
GTGCGCAAGC AGGTCGCGCT GTGCCTCGAG ACCGACGACC GGCTCGAACT GATGCCGATT
CTGCTGCTCG GGCCGCCGGG CATCGGCAAG ACCCATTTCG CGAAGGCGCT CGCGAAGCTG
CTCGGCACCG CGTATCACTA CGTGCCGATG AGTTCGCTGA CGGCCGGCTG GATCCTGTCG
GGCGCGTCGT CGCAATGGAA GAACGCGAAG CCCGGCAAGG TGTTCGAAGC GCTCGTCAAC
GGCAGCTACG CGAACCCGGT GATCGCGGTC GACGAGATCG ACAAGGCCGG CAGCGACGCG
CAATACGATC CGCTCGGTGC GCTGTACGCG TTGCTCGAGC ACGACACGGC GCGCGCGTTC
GTCGACGAAT TCGCCGAAGT GCCGATCGAT GCGGGCAACG TGATCTGGAT CGCGACCGCG
AACGAAGCGC AGGCGATTCC GGAGCCGCTG CTGAACCGGA TGAACGTGTA CGAGATCGCC
CCGCCGGATG CGGCCGGCGC GCGACGGATC GCGCAGACGA TCTACGACGA GATCCGCACG
TCGCACGCGT GGGGGCAGCG CTTCCCCGAC ACGCTCGACG ACGACGCGCT CGACGTGCTC
GCCGCCACGC CGCCGCGCAC GATGCGCCGC GCGCTGCTGC ATGCGTTCGG CGCCGCGCGG
CTCGACGGCC GCGACGTGAT CGCACCGTCC GACATCCGCG CCGACGAGGG GGCCGCGAAG
CGCCGACCGA TCGGGTTCTG A
 
Protein sequence
MTTAMVKQEL AVASFSTVYD LEQVETALND LNESASDALR ATYERMLKTG NLRFCVKPNR 
MPSFDELGDA LPNFTEPLGD VRKQVALCLE TDDRLELMPI LLLGPPGIGK THFAKALAKL
LGTAYHYVPM SSLTAGWILS GASSQWKNAK PGKVFEALVN GSYANPVIAV DEIDKAGSDA
QYDPLGALYA LLEHDTARAF VDEFAEVPID AGNVIWIATA NEAQAIPEPL LNRMNVYEIA
PPDAAGARRI AQTIYDEIRT SHAWGQRFPD TLDDDALDVL AATPPRTMRR ALLHAFGAAR
LDGRDVIAPS DIRADEGAAK RRPIGF