| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2814 |
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| Symbol | |
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| ID | 6177595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3119192 |
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| End bp | 3120049 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641682591 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001809507 |
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| Protein GI | 172061855 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.499703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.271127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA GACCCGCGAT GCAACCGATC CGGACGATGC GGCCGGCCGA GGCCGGCTTC
ACCGCCGCCG CGCGGCGCCT GCTGCGCGCG AAACTCCCGC CGGCCGCGTT GCTCGCGACG
GCGGCCGTGA CCGTCGCGGC CGTCGTCGCG ACGACCGGCT GGCGGGCCGC CGGCCCCGCG
CCGAGCGCCG CGCAGCTCGA AGAGTGGCAG GCGATGGTCG CGCAGGCCGT CGAGCCGAAC
GCGCTCGCGC AGTTGCGCAC CCTCGCACGG CGCGGTTCGG GCGACGCGCA GGCGGCGCTC
GGGATCGCGC TCGTCGATGC GCGCGAGCCG GGGCTGCGTG ACGAGGGGCG CGGCTGGCTG
GAAACCGCCG CGGACGGCAA GACCGACTCG CCCGCCGCGC GACGCGCGCA GCTCGCACTC
GGCAAGGCCC TGCTGCTCGG CAGCGGCGAC ATCCCGAAGG ACTATGCACG CGCCCGTGCG
CTGCTCGGCG AAGCGGCCGG CCAGGGCGAT CCGGCCGCCG CGTACTACCT CGGGCTGATC
TATCGCAGCG GCTACGGCAC CGCGGCCGAC CCCGTGCAGG CCGCGCACTG GTTCGAACTC
GCGTCGCGCG CGGATATCCC CTCCGCGGAC TTCATGCTCG CGAACGCGTA CCGCGACGGC
AGCGGCGTGC CGCGCGACGA AGCGCGCGCG CTTGCGCTGT ATCGGCGTGC GGCGGAACAC
GAGCTGCCGG AAGCCGTGCA GACGCTCGCG ATGGCGTATC GCAATGGCGA GCTTGGGCTC
AAGCCCGATG CGGATGAATT CCACGCGCAG TGGATCGAGA CCGCGCATGC GTTGAAGCAT
CCGGTTGTGG CGCCGTGA
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| Protein sequence | MTMRPAMQPI RTMRPAEAGF TAAARRLLRA KLPPAALLAT AAVTVAAVVA TTGWRAAGPA
PSAAQLEEWQ AMVAQAVEPN ALAQLRTLAR RGSGDAQAAL GIALVDAREP GLRDEGRGWL
ETAADGKTDS PAARRAQLAL GKALLLGSGD IPKDYARARA LLGEAAGQGD PAAAYYLGLI
YRSGYGTAAD PVQAAHWFEL ASRADIPSAD FMLANAYRDG SGVPRDEARA LALYRRAAEH
ELPEAVQTLA MAYRNGELGL KPDADEFHAQ WIETAHALKH PVVAP
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