| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2662 |
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| Symbol | |
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| ID | 6179025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 2957171 |
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| End bp | 2958766 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682438 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001809355 |
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| Protein GI | 172061703 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCC ATACTGCCGC CCACCATTCG AGCGGGCAAG TCCTGCCGTT CCGCGAATCG
CTGCTGGCGA TGATCGGGAT CTCGTTCGTC ACCATGCTCG TCGCGCTCGA CCAGACGGTC
GTCGGCACCG CGTTGCCGAC CATCGTCGCC GAACTCAGGG GCTTCGACCT GTACGCGTGG
GTGGCGACCT CGTATCTGCT CAGTTCCGTC ATCACCGTGC CGGTCTTCGG CCGCCTCGGC
GACTATTACG GCCGAAAGCC GTTCGTCATC GCGTCGATCG TCGTGTTCAC CGGCGCATCG
GTGCTGTGCG GAATGGCGAA CGACATGCTG TACCTGGTGC TCGCGCGCGG GCTGCAGGGG
ATCGGCGGCG GGATGCTGGT CGGCACCGCG TTCGCTTGCA TTCCCGACCT GTTCCCCGAT
TCCGTCGTGC GGCTGCGCTG GCAGGTGCTG ATGAGTTCCG CGTTCGGCAT CGCGAACGCG
GTCGGGCCGT CGCTCGGCGG GATCCTGACG CAATCGTTCG GCTGGCGCTC GGTGTTCTAC
GTGAACCTGC CGGTCGGCCT GCTTTCGCTG TTCTTCGTGT GGCGCTACTT GCCGCACCTG
CGGCATGTCG AGCACGACCG CAAGATGCGC CTCGACTGGC CGGGCGCGCT GCTGATCGCG
CTGTCGCTCG GCGCGCTGCA GCTGTTCGTC GAATGGCTGC CGAAGTACGG CGTCACGAGC
TGGGCGTCGC TGCTGCTGTT CGTCGCGGTC GGCGCCGGTA TCGGGCTGTG GCATTGGGAA
AAGCGCTGCG CGCAGCCGAT CCTGCCGTTC GACATGTTCG GCAACCGCGC GCTGTCCGCG
CTGTTCGTGC TCGCGATCCT CGCCGGCTTC TCGATGTTCT CGCTGCTGTT CTACGCGCCG
CTGCTGTTCC AGGGCGGCTT CGGGATGTCG CCGAAGGAGG CGGGGCTCGT GATCACGCCG
CTCGTCGTGT TCATCACGAT CGGCAGCATC ATGAACGGCC GCGTCATCAC GCGCATCCGC
CATCCGAACG CGATGCTGCA GGTCGGTTTC GTGCTGTTCG CGATCGCGTG CGCGGGCATC
GTCGTGTCGA CCCACGCGAC GCCGACCTGG ATGCTGATGG CGCTGATGGT CGCCGGCGGC
ATCGGTCTCG GTTTCGTGCT GCCCAACCTT ACCGTGTTCG CGCAGCAGAC GGCCGGCCGC
GAGCACCTTG GCATCGCGAC CGCGCTGCTG CAGTCGCTGC GGATGGTCGG CGGGATGCTC
GGCACGGCGC TGACGGGCAC GCTCGTCAAC CAGATGTATT CGAGCGGCGT GCGCGATGCG
CTGTCGGGCG ACCACGCGCT GCAATGGCAT GCGCGGCTCG CCGATCCGCA GATCCTGATC
GACCGCGCCG CGCAAGGCGG TCTCGTCGCG GAGCTGACCC GCGCCGGGCA TAATGGCGCG
CTGCTGCTGG AAGCGGCCCG CGAATCGCTG GTTGGCGCGA TTCACCTGGG TGTCGCGATG
GCGGCCGTCG TCGCCGTGGT GTCGGTGTGG CAGTGCCGCC GCGTGCCGCC GATCGCGCTG
CGGCGCAAGA TCGAGCCGCA TGTCGCGGCC GATTGA
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| Protein sequence | MAVHTAAHHS SGQVLPFRES LLAMIGISFV TMLVALDQTV VGTALPTIVA ELRGFDLYAW
VATSYLLSSV ITVPVFGRLG DYYGRKPFVI ASIVVFTGAS VLCGMANDML YLVLARGLQG
IGGGMLVGTA FACIPDLFPD SVVRLRWQVL MSSAFGIANA VGPSLGGILT QSFGWRSVFY
VNLPVGLLSL FFVWRYLPHL RHVEHDRKMR LDWPGALLIA LSLGALQLFV EWLPKYGVTS
WASLLLFVAV GAGIGLWHWE KRCAQPILPF DMFGNRALSA LFVLAILAGF SMFSLLFYAP
LLFQGGFGMS PKEAGLVITP LVVFITIGSI MNGRVITRIR HPNAMLQVGF VLFAIACAGI
VVSTHATPTW MLMALMVAGG IGLGFVLPNL TVFAQQTAGR EHLGIATALL QSLRMVGGML
GTALTGTLVN QMYSSGVRDA LSGDHALQWH ARLADPQILI DRAAQGGLVA ELTRAGHNGA
LLLEAARESL VGAIHLGVAM AAVVAVVSVW QCRRVPPIAL RRKIEPHVAA D
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